Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0439.Seq
(908 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC033902-1|AAH33902.1| 971|Homo sapiens calsyntenin 1 protein. 32 2.5
AY753301-1|AAV30551.1| 971|Homo sapiens alcadein alpha-1 protein. 32 2.5
AL691449-3|CAI15699.1| 971|Homo sapiens calsyntenin 1 protein. 32 2.5
AL691449-2|CAI15700.1| 981|Homo sapiens calsyntenin 1 protein. 32 2.5
AL357140-2|CAI16884.1| 971|Homo sapiens calsyntenin 1 protein. 32 2.5
AL357140-1|CAI16885.1| 981|Homo sapiens calsyntenin 1 protein. 32 2.5
AF438482-1|AAQ04552.1| 971|Homo sapiens non-classical cadherin ... 32 2.5
AB020718-1|BAA74934.2| 1056|Homo sapiens KIAA0911 protein protein. 32 2.5
Y10388-1|CAA71414.2| 759|Homo sapiens Graf protein protein. 31 7.6
BC068555-1|AAH68555.1| 759|Homo sapiens ARHGAP26 protein protein. 31 7.6
AF141884-1|AAD39482.1| 814|Homo sapiens oligophrenin-1 like pro... 31 7.6
>BC033902-1|AAH33902.1| 971|Homo sapiens calsyntenin 1 protein.
Length = 971
Score = 32.3 bits (70), Expect = 2.5
Identities = 23/79 (29%), Positives = 36/79 (45%)
Frame = +1
Query: 28 LVIPEVRGPIVDLPEIKVQDSLTKSLHFKSEKNSNSSKLDKTNSTKIVPLNDNKWKVHLL 207
+V+ + G V + K+ L K F + D TN K +K VH+
Sbjct: 89 VVVDKSTGEGVIRSKEKLDCELQKDYSFTIQAYDCGKGPDGTNVKK-----SHKATVHIQ 143
Query: 208 PNNIPKYSPAFKRKSFKYT 264
N++ +Y+P FK KS+K T
Sbjct: 144 VNDVNEYAPVFKEKSYKAT 162
>AY753301-1|AAV30551.1| 971|Homo sapiens alcadein alpha-1 protein.
Length = 971
Score = 32.3 bits (70), Expect = 2.5
Identities = 23/79 (29%), Positives = 36/79 (45%)
Frame = +1
Query: 28 LVIPEVRGPIVDLPEIKVQDSLTKSLHFKSEKNSNSSKLDKTNSTKIVPLNDNKWKVHLL 207
+V+ + G V + K+ L K F + D TN K +K VH+
Sbjct: 89 VVVDKSTGEGVIRSKEKLDCELQKDYSFTIQAYDCGKGPDGTNVKK-----SHKATVHIQ 143
Query: 208 PNNIPKYSPAFKRKSFKYT 264
N++ +Y+P FK KS+K T
Sbjct: 144 VNDVNEYAPVFKEKSYKAT 162
>AL691449-3|CAI15699.1| 971|Homo sapiens calsyntenin 1 protein.
Length = 971
Score = 32.3 bits (70), Expect = 2.5
Identities = 23/79 (29%), Positives = 36/79 (45%)
Frame = +1
Query: 28 LVIPEVRGPIVDLPEIKVQDSLTKSLHFKSEKNSNSSKLDKTNSTKIVPLNDNKWKVHLL 207
+V+ + G V + K+ L K F + D TN K +K VH+
Sbjct: 89 VVVDKSTGEGVIRSKEKLDCELQKDYSFTIQAYDCGKGPDGTNVKK-----SHKATVHIQ 143
Query: 208 PNNIPKYSPAFKRKSFKYT 264
N++ +Y+P FK KS+K T
Sbjct: 144 VNDVNEYAPVFKEKSYKAT 162
>AL691449-2|CAI15700.1| 981|Homo sapiens calsyntenin 1 protein.
Length = 981
Score = 32.3 bits (70), Expect = 2.5
Identities = 23/79 (29%), Positives = 36/79 (45%)
Frame = +1
Query: 28 LVIPEVRGPIVDLPEIKVQDSLTKSLHFKSEKNSNSSKLDKTNSTKIVPLNDNKWKVHLL 207
+V+ + G V + K+ L K F + D TN K +K VH+
Sbjct: 99 VVVDKSTGEGVIRSKEKLDCELQKDYSFTIQAYDCGKGPDGTNVKK-----SHKATVHIQ 153
Query: 208 PNNIPKYSPAFKRKSFKYT 264
N++ +Y+P FK KS+K T
Sbjct: 154 VNDVNEYAPVFKEKSYKAT 172
>AL357140-2|CAI16884.1| 971|Homo sapiens calsyntenin 1 protein.
Length = 971
Score = 32.3 bits (70), Expect = 2.5
Identities = 23/79 (29%), Positives = 36/79 (45%)
Frame = +1
Query: 28 LVIPEVRGPIVDLPEIKVQDSLTKSLHFKSEKNSNSSKLDKTNSTKIVPLNDNKWKVHLL 207
+V+ + G V + K+ L K F + D TN K +K VH+
Sbjct: 89 VVVDKSTGEGVIRSKEKLDCELQKDYSFTIQAYDCGKGPDGTNVKK-----SHKATVHIQ 143
Query: 208 PNNIPKYSPAFKRKSFKYT 264
N++ +Y+P FK KS+K T
Sbjct: 144 VNDVNEYAPVFKEKSYKAT 162
>AL357140-1|CAI16885.1| 981|Homo sapiens calsyntenin 1 protein.
Length = 981
Score = 32.3 bits (70), Expect = 2.5
Identities = 23/79 (29%), Positives = 36/79 (45%)
Frame = +1
Query: 28 LVIPEVRGPIVDLPEIKVQDSLTKSLHFKSEKNSNSSKLDKTNSTKIVPLNDNKWKVHLL 207
+V+ + G V + K+ L K F + D TN K +K VH+
Sbjct: 99 VVVDKSTGEGVIRSKEKLDCELQKDYSFTIQAYDCGKGPDGTNVKK-----SHKATVHIQ 153
Query: 208 PNNIPKYSPAFKRKSFKYT 264
N++ +Y+P FK KS+K T
Sbjct: 154 VNDVNEYAPVFKEKSYKAT 172
>AF438482-1|AAQ04552.1| 971|Homo sapiens non-classical cadherin
XB31alpha1 protein.
Length = 971
Score = 32.3 bits (70), Expect = 2.5
Identities = 23/79 (29%), Positives = 36/79 (45%)
Frame = +1
Query: 28 LVIPEVRGPIVDLPEIKVQDSLTKSLHFKSEKNSNSSKLDKTNSTKIVPLNDNKWKVHLL 207
+V+ + G V + K+ L K F + D TN K +K VH+
Sbjct: 89 VVVDKSTGEGVIRSKEKLDCELQKDYSFTIQAYDCGKGPDGTNVKK-----SHKATVHIQ 143
Query: 208 PNNIPKYSPAFKRKSFKYT 264
N++ +Y+P FK KS+K T
Sbjct: 144 VNDVNEYAPVFKEKSYKAT 162
>AB020718-1|BAA74934.2| 1056|Homo sapiens KIAA0911 protein protein.
Length = 1056
Score = 32.3 bits (70), Expect = 2.5
Identities = 23/79 (29%), Positives = 36/79 (45%)
Frame = +1
Query: 28 LVIPEVRGPIVDLPEIKVQDSLTKSLHFKSEKNSNSSKLDKTNSTKIVPLNDNKWKVHLL 207
+V+ + G V + K+ L K F + D TN K +K VH+
Sbjct: 174 VVVDKSTGEGVIRSKEKLDCELQKDYSFTIQAYDCGKGPDGTNVKK-----SHKATVHIQ 228
Query: 208 PNNIPKYSPAFKRKSFKYT 264
N++ +Y+P FK KS+K T
Sbjct: 229 VNDVNEYAPVFKEKSYKAT 247
>Y10388-1|CAA71414.2| 759|Homo sapiens Graf protein protein.
Length = 759
Score = 30.7 bits (66), Expect = 7.6
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +1
Query: 64 LPEIKVQDSLTKSLHFKSEKNSNSSKLDKTNSTKIVPLNDNKWKVHLLPN 213
LP ++ D S HF+ S+ ++LDKTN + D K + L N
Sbjct: 3 LPALEFSDCCLDSPHFRETLKSHEAELDKTNKFIKELIKDGKSLISALKN 52
>BC068555-1|AAH68555.1| 759|Homo sapiens ARHGAP26 protein protein.
Length = 759
Score = 30.7 bits (66), Expect = 7.6
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +1
Query: 64 LPEIKVQDSLTKSLHFKSEKNSNSSKLDKTNSTKIVPLNDNKWKVHLLPN 213
LP ++ D S HF+ S+ ++LDKTN + D K + L N
Sbjct: 3 LPALEFSDCCLDSPHFRETLKSHEAELDKTNKFIKELIKDGKSLISALKN 52
>AF141884-1|AAD39482.1| 814|Homo sapiens oligophrenin-1 like
protein protein.
Length = 814
Score = 30.7 bits (66), Expect = 7.6
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +1
Query: 64 LPEIKVQDSLTKSLHFKSEKNSNSSKLDKTNSTKIVPLNDNKWKVHLLPN 213
LP ++ D S HF+ S+ ++LDKTN + D K + L N
Sbjct: 3 LPALEFSDCCLDSPHFRETLKSHEAELDKTNKFIKELIKDGKSLISALKN 52
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,502,514
Number of Sequences: 237096
Number of extensions: 2466752
Number of successful extensions: 5085
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5085
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11770329464
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -