Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0438.Seq
         (512 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    23   1.2  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    23   1.6  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   4.9  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   8.5  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   8.5  

>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -2

Query: 316 LAHHARIQDHSATGRPPGIREGARS 242
           LAHH R +  S+ G  P   E A+S
Sbjct: 73  LAHHCRFKFSSSVGWSPAGHEEAQS 97


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -3

Query: 417 HSVAPKVTPLVISFTKPVSF 358
           H   PK  P+    +KPVSF
Sbjct: 34  HQKCPKPAPIYSPVSKPVSF 53


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = -1

Query: 302 EDPGSQRYRTPTRNP*GREKQQTS 231
           E PG     TP   P  REK  TS
Sbjct: 831 EPPGVPLNSTPRSTPDKREKSPTS 854


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -2

Query: 319 FLAHHARIQDHSATGRPPGIREG 251
           F + HA IQ H + G  P    G
Sbjct: 55  FQSEHAVIQTHPSIGGGPRFSSG 77


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -2

Query: 319 FLAHHARIQDHSATGRPPGIREG 251
           F + HA IQ H + G  P    G
Sbjct: 55  FQSEHAVIQTHPSIGGGPRFSSG 77


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,913
Number of Sequences: 336
Number of extensions: 1896
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12258909
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)