Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0438.Seq
         (512 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            27   0.37 
AY214334-1|AAP69612.1|  519|Anopheles gambiae nicotinate phospho...    27   0.49 
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    26   0.65 
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    24   2.6  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   8.0  

>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 27.1 bits (57), Expect = 0.37
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = -2

Query: 475  PHAPPLRSTVPAAASELMGAFGGSQGHALSDLLHQ 371
            P   P+ S  PA    ++   GG  G A + LLHQ
Sbjct: 1091 PPTEPISSATPAPGPFVISGNGGGVGGAGAQLLHQ 1125


>AY214334-1|AAP69612.1|  519|Anopheles gambiae nicotinate
           phosphoribosyltransferase-like protein protein.
          Length = 519

 Score = 26.6 bits (56), Expect = 0.49
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -2

Query: 409 GSQGHALSDLLHQAGFIPADLSQSTSC 329
           G+ GHAL DLL +    P ++ Q   C
Sbjct: 403 GADGHALIDLLQRVDENPPEVGQKVLC 429


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 26.2 bits (55), Expect = 0.65
 Identities = 13/43 (30%), Positives = 19/43 (44%)
 Frame = -2

Query: 463  PLRSTVPAAASELMGAFGGSQGHALSDLLHQAGFIPADLSQST 335
            P R++ P+   E +GA G      LS  +   G  P    +ST
Sbjct: 1323 PFRTSTPSKEDEALGALGPLHHRLLSSNVRSLGNSPVHSGRST 1365


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -2

Query: 286 SATGRPPGIREGARSSRQAAITTGR 212
           S  G P  +R G+R S Q  I  GR
Sbjct: 552 SLPGSPFNLRRGSRGSHQFTIRNGR 576


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 22.6 bits (46), Expect = 8.0
 Identities = 10/28 (35%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
 Frame = -2

Query: 313 AHHAR-IQDHSATGRPPGIREGARSSRQ 233
           +HH   +  H+A   PPG   GA++  Q
Sbjct: 816 SHHLHHLHHHAAQQPPPGSHPGAQTQPQ 843


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 462,976
Number of Sequences: 2352
Number of extensions: 8844
Number of successful extensions: 16
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46514490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)