Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0438.Seq
(512 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 26 0.26
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 23 2.4
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 23 2.4
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 23 2.4
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 23 2.4
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 23 2.4
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 23 2.4
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 23 2.4
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 23 2.4
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 23 2.4
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 23 2.4
AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly pro... 23 2.4
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 21 7.5
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 21 7.5
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 21 7.5
AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly pro... 21 9.9
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 25.8 bits (54), Expect = 0.26
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = -1
Query: 362 HSCRSEPVYLVSYDFSCTPCE-DPGSQR-YRTPTRNP 258
HSC + P + S D+ T C DPG R + P + P
Sbjct: 277 HSCEACPAHSKSSDYGFTECRCDPGYFRAEKDPKKMP 313
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.6 bits (46), Expect = 2.4
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +2
Query: 290 ILDPRMVCKKNRRTRGRLAQICRNE 364
+L+ R CK+ R+R R ++ +NE
Sbjct: 29 LLEERTSCKRYSRSREREQKLYKNE 53
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.6 bits (46), Expect = 2.4
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +2
Query: 290 ILDPRMVCKKNRRTRGRLAQICRNE 364
+L+ R CK+ R+R R ++ +NE
Sbjct: 29 LLEERTSCKRYSRSREREQKLYKNE 53
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.6 bits (46), Expect = 2.4
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +2
Query: 290 ILDPRMVCKKNRRTRGRLAQICRNE 364
+L+ R CK+ R+R R ++ +NE
Sbjct: 29 LLEERTSCKRYSRSREREQKLYKNE 53
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.6 bits (46), Expect = 2.4
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +2
Query: 290 ILDPRMVCKKNRRTRGRLAQICRNE 364
+L+ R CK+ R+R R ++ +NE
Sbjct: 29 LLEERTSCKRYSRSREREQKLYKNE 53
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 22.6 bits (46), Expect = 2.4
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +2
Query: 290 ILDPRMVCKKNRRTRGRLAQICRNE 364
+L+ R CK+ R+R R ++ +NE
Sbjct: 262 LLEERTSCKRYSRSREREQKLYKNE 286
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 2.4
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +2
Query: 290 ILDPRMVCKKNRRTRGRLAQICRNE 364
+L+ R CK+ R+R R ++ +NE
Sbjct: 262 LLEERTSCKRYSRSREREQKLYKNE 286
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 2.4
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +2
Query: 290 ILDPRMVCKKNRRTRGRLAQICRNE 364
+L+ R CK+ R+R R ++ +NE
Sbjct: 262 LLEERTSCKRYSRSREREQKLYKNE 286
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 2.4
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +2
Query: 290 ILDPRMVCKKNRRTRGRLAQICRNE 364
+L+ R CK+ R+R R ++ +NE
Sbjct: 262 LLEERTSCKRYSRSREREQKLYKNE 286
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 2.4
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +2
Query: 290 ILDPRMVCKKNRRTRGRLAQICRNE 364
+L+ R CK+ R+R R ++ +NE
Sbjct: 262 LLEERTSCKRYSRSREREQKLYKNE 286
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.6 bits (46), Expect = 2.4
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +2
Query: 290 ILDPRMVCKKNRRTRGRLAQICRNE 364
+L+ R CK+ R+R R ++ +NE
Sbjct: 251 LLEERTSCKRYSRSREREQKLYKNE 275
>AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly
protein MRJP6 protein.
Length = 437
Score = 22.6 bits (46), Expect = 2.4
Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = -2
Query: 253 GARSSRQAAITTGRISCQTSLPFIYN--HNRT 164
G+ RQAAI +G + PF + HN+T
Sbjct: 49 GSDEKRQAAIQSGEYDYTKNYPFDVDQWHNKT 80
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 21.0 bits (42), Expect = 7.5
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +2
Query: 287 VILDPRMVCKKNRRT 331
VILDP+++ K RT
Sbjct: 153 VILDPKLIAKHYLRT 167
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 21.0 bits (42), Expect = 7.5
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +2
Query: 287 VILDPRMVCKKNRRT 331
VILDP+++ K RT
Sbjct: 153 VILDPKLIAKHYLRT 167
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 21.0 bits (42), Expect = 7.5
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +2
Query: 287 VILDPRMVCKKNRRT 331
VILDP+++ K RT
Sbjct: 153 VILDPKLIAKHYLRT 167
>AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly
protein MRJP2 protein.
Length = 452
Score = 20.6 bits (41), Expect = 9.9
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -2
Query: 253 GARSSRQAAITTGRISCQTSLPF 185
G+ RQAAI +G + PF
Sbjct: 46 GSEERRQAAIQSGEYDHTKNYPF 68
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,489
Number of Sequences: 438
Number of extensions: 2576
Number of successful extensions: 16
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14232156
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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