Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0436.Seq
(904 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g51490.1 68416.m05639 sugar transporter family protein simila... 38 0.012
At4g35300.2 68417.m05018 transporter-related low similarity to h... 35 0.085
At4g35300.1 68417.m05017 transporter-related low similarity to h... 35 0.085
At1g20840.1 68414.m02611 transporter-related low similarity to D... 35 0.085
At3g05150.1 68416.m00559 sugar transporter family protein simila... 34 0.15
At1g75220.1 68414.m08738 integral membrane protein, putative str... 32 0.60
At2g48020.2 68415.m06011 sugar transporter, putative similar to ... 31 1.0
At2g48020.1 68415.m06010 sugar transporter, putative similar to ... 31 1.0
At5g17010.1 68418.m01992 sugar transporter family protein simila... 31 1.4
At4g04750.1 68417.m00697 sugar transporter family protein simila... 29 3.2
At3g08910.1 68416.m01037 DNAJ heat shock protein, putative simil... 29 3.2
At3g03090.1 68416.m00305 sugar transporter family protein simila... 29 3.2
At1g30220.1 68414.m03697 sugar transporter family protein simila... 29 3.2
At5g01390.1 68418.m00052 DNAJ heat shock protein, putative simil... 29 4.2
At3g57990.1 68416.m06463 expressed protein 29 5.6
At1g19450.1 68414.m02423 integral membrane protein, putative / s... 28 7.4
At2g18540.1 68415.m02160 cupin family protein contains Pfam prof... 28 9.7
>At3g51490.1 68416.m05639 sugar transporter family protein similar
to D-xylose proton-symporter [Lactobacillus brevis]
GI:2895856; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 729
Score = 37.5 bits (83), Expect = 0.012
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = -2
Query: 270 TLPCDVKNIGIAAVFGFFGISXXXXXXXXXXXLPETKGKSLLQIEQYY 127
TLP +K+IGIA VFG + I +PETKG L I +++
Sbjct: 665 TLPVMLKSIGIAGVFGIYAIVCAVAWVFVYLKVPETKGMPLEVISEFF 712
Score = 34.3 bits (75), Expect = 0.11
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -3
Query: 416 ILAYVGFNTLGFFVLPGLMIGELLPTKVRGLC 321
+ Y+ +GF +P ++ E+ PT VRGLC
Sbjct: 616 VTVYLSCFVMGFGAIPNILCSEIFPTSVRGLC 647
>At4g35300.2 68417.m05018 transporter-related low similarity to
hexose transporter [Solanum tuberosum] GI:8347246;
contains Pfam profile PF00083: major facilitator
superfamily protein
Length = 729
Score = 34.7 bits (76), Expect = 0.085
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -3
Query: 422 VLILAYVGFNTLGFFVLPGLMIGELLPTKVRGLC 321
V ++ Y F +GF P ++ E+ PT+VRG+C
Sbjct: 618 VSVVLYFCFFVMGFGPAPNILCSEIFPTRVRGIC 651
Score = 34.3 bits (75), Expect = 0.11
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = -2
Query: 270 TLPCDVKNIGIAAVFGFFGISXXXXXXXXXXXLPETKGKSLLQIEQYY 127
+LP +K+IG+A VFG + I +PETKG L I +++
Sbjct: 669 SLPVLLKSIGLAGVFGMYAIVCCISWVFVFIKVPETKGMPLEVITEFF 716
>At4g35300.1 68417.m05017 transporter-related low similarity to
hexose transporter [Solanum tuberosum] GI:8347246;
contains Pfam profile PF00083: major facilitator
superfamily protein
Length = 739
Score = 34.7 bits (76), Expect = 0.085
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -3
Query: 422 VLILAYVGFNTLGFFVLPGLMIGELLPTKVRGLC 321
V ++ Y F +GF P ++ E+ PT+VRG+C
Sbjct: 628 VSVVLYFCFFVMGFGPAPNILCSEIFPTRVRGIC 661
Score = 34.3 bits (75), Expect = 0.11
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = -2
Query: 270 TLPCDVKNIGIAAVFGFFGISXXXXXXXXXXXLPETKGKSLLQIEQYY 127
+LP +K+IG+A VFG + I +PETKG L I +++
Sbjct: 679 SLPVLLKSIGLAGVFGMYAIVCCISWVFVFIKVPETKGMPLEVITEFF 726
>At1g20840.1 68414.m02611 transporter-related low similarity to
D-xylose proton-symporter [Lactobacillus brevis]
GI:2895856; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 734
Score = 34.7 bits (76), Expect = 0.085
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = -3
Query: 416 ILAYVGFNTLGFFVLPGLMIGELLPTKVRGLC 321
++ Y F +G+ +P ++ E+ PT+VRGLC
Sbjct: 623 VVLYFCFFVMGYGPIPNILCSEIFPTRVRGLC 654
>At3g05150.1 68416.m00559 sugar transporter family protein similar
to sugar-porter family proteins 1 and 2 [Arabidopsis
thaliana] GI:14585699, GI:14585701; contains Pfam
profile PF00083: major facilitator superfamily protein
Length = 470
Score = 33.9 bits (74), Expect = 0.15
Identities = 14/50 (28%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Frame = -3
Query: 416 ILAYVGFNTLGFFVLPGLMIGELLPTKVRGLCGGYIFC--FFNSFLFGFT 273
+L Y+G ++G +P +++ E+ P ++G GG + + +S+L FT
Sbjct: 374 VLVYIGSFSIGMGAIPWVIMSEIFPINLKGTAGGLVTVVNWLSSWLVSFT 423
>At1g75220.1 68414.m08738 integral membrane protein, putative strong
similarity to integral membrane protein GI:1209756 from
[Beta vulgaris]; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 487
Score = 31.9 bits (69), Expect = 0.60
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = -3
Query: 416 ILAYVGFNTLGFFVLPGLMIGELLPTKVRGLCG 318
++A V F +LG +P L++ E+LP ++GL G
Sbjct: 391 VVAMVVFFSLGMGPIPWLIMSEILPVNIKGLAG 423
>At2g48020.2 68415.m06011 sugar transporter, putative similar to
ERD6 protein {Arabidopsis thaliana} GI:3123712,
sugar-porter family proteins 1 and 2 [Arabidopsis
thaliana] GI:14585699, GI:14585701; contains Pfam
profile PF00083: major facilitator superfamily protein
Length = 463
Score = 31.1 bits (67), Expect = 1.0
Identities = 10/34 (29%), Positives = 21/34 (61%)
Frame = -3
Query: 416 ILAYVGFNTLGFFVLPGLMIGELLPTKVRGLCGG 315
I+ Y+G + G +P +++ E+ P ++G+ GG
Sbjct: 366 IMVYIGSFSAGMGAMPWVVMSEIFPINIKGVAGG 399
>At2g48020.1 68415.m06010 sugar transporter, putative similar to
ERD6 protein {Arabidopsis thaliana} GI:3123712,
sugar-porter family proteins 1 and 2 [Arabidopsis
thaliana] GI:14585699, GI:14585701; contains Pfam
profile PF00083: major facilitator superfamily protein
Length = 463
Score = 31.1 bits (67), Expect = 1.0
Identities = 10/34 (29%), Positives = 21/34 (61%)
Frame = -3
Query: 416 ILAYVGFNTLGFFVLPGLMIGELLPTKVRGLCGG 315
I+ Y+G + G +P +++ E+ P ++G+ GG
Sbjct: 366 IMVYIGSFSAGMGAMPWVVMSEIFPINIKGVAGG 399
>At5g17010.1 68418.m01992 sugar transporter family protein similar
to D-xylose proton-symporter [Lactobacillus brevis]
GI:2895856; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 503
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = -3
Query: 422 VLILAYVGFNTLGFFVLPGLMIGELLPTKVRG 327
V +L YVG L F + LMI E+ P K+RG
Sbjct: 404 VALLLYVGCYQLSFGPIGWLMISEIFPLKLRG 435
>At4g04750.1 68417.m00697 sugar transporter family protein similar
to sugar-porter family proteins 1 and 2 [Arabidopsis
thaliana] GI:14585699, GI:14585701; contains Pfam
profile PF00083: major facilitator superfamily protein
Length = 461
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = -3
Query: 443 GTGIAPPVLILAYVGFNTLGFFVLPGLMIGELLPTKVRGLCG 318
GT I + ++ Y G LG +P ++ E+ P V+G G
Sbjct: 346 GTPIMALISVMVYFGSYGLGMGPIPWIIASEIYPVDVKGAAG 387
>At3g08910.1 68416.m01037 DNAJ heat shock protein, putative similar
to SP|P25685 DnaJ homolog subfamily B member 1 (Heat
shock 40 kDa protein 1) {Homo sapiens}; contains Pfam
profile PF00226: DnaJ domain
Length = 323
Score = 29.5 bits (63), Expect = 3.2
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = +1
Query: 388 NVLKPTYARIRTGGAMPVPGPCASRAANARVQTEVPMPEIRRVSDE*AAVTR 543
NV+ P+Y + G MP+P S+ N R++ V P R +++ + + R
Sbjct: 269 NVISPSYEEVVKGEGMPIPKD-PSKKGNLRIKFTVKFPS-RLTTEQKSGIKR 318
>At3g03090.1 68416.m00305 sugar transporter family protein similar
to xylose permease [Bacillus megaterium] GI:1924928;
contains Pfam profile PF00083: major facilitator
superfamily protein
Length = 503
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -3
Query: 416 ILAYVGFNTLGFFVLPGLMIGELLPTKVRG 327
+L YVG L F + LMI E+ P K+RG
Sbjct: 406 LLLYVGCYQLSFGPIGWLMISEIFPLKLRG 435
>At1g30220.1 68414.m03697 sugar transporter family protein similar
to SP|Q96QE2 Proton myo-inositol co-transporter (Hmit)
[Homo sapiens]; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 580
Score = 29.5 bits (63), Expect = 3.2
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -3
Query: 407 YVGFNTLGFFVLPGLMIGELLPTKVRGLCGG 315
Y+ F + G +P ++ E+ P + RG+CGG
Sbjct: 463 YIIFFSPGMGTVPWIVNSEIYPLRFRGICGG 493
>At5g01390.1 68418.m00052 DNAJ heat shock protein, putative similar
to SP|Q9QYJ3 DnaJ homolog subfamily B member 1 (Heat
shock 40 kDa protein 1) {Mus musculus}; contains Pfam
profile PF00226: DnaJ domain
Length = 335
Score = 29.1 bits (62), Expect = 4.2
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 388 NVLKPTYARIRTGGAMPVPGPCASRAANARVQTEVPMP 501
NV+ P+Y + G MP+P SR N R++ + P
Sbjct: 282 NVISPSYEEVVKGEGMPIPKD-PSRKGNLRIRFIIKFP 318
>At3g57990.1 68416.m06463 expressed protein
Length = 367
Score = 28.7 bits (61), Expect = 5.6
Identities = 35/140 (25%), Positives = 55/140 (39%), Gaps = 4/140 (2%)
Frame = -3
Query: 737 SFESPVLKPLILINTFNLLQTCQKVMSLYFMPIKIVEESRRLSAA*DGSQRKRF----SK 570
SF SP+ +++ FNLL L+F P + + S + S + G +R
Sbjct: 77 SFGSPISSSMLMSAEFNLLGQGNPSFMLHFKP-QFGDFSIKKSHSSSGFERNLIKSMNGS 135
Query: 569 VSSDDPRLHLVTAAHSSDTRLISGIGTSVCTXXXXXXXAQGPGTGIAPPVLILAYVGFNT 390
VS DD + +V DT ++G G + G G+ V + A
Sbjct: 136 VSEDDSSIEVV------DTPAVNGCGGGFRKVTVLPSTSAGDIAGLLSGVEVAARTSLPV 189
Query: 389 LGFFVLPGLMIGELLPTKVR 330
G VL G +PT++R
Sbjct: 190 RGRAVL-NFRWGVRVPTEIR 208
>At1g19450.1 68414.m02423 integral membrane protein, putative /
sugar transporter family protein similar to GB:U43629
GI:1209756 integral membrane protein from [Beta
vulgaris]; contains Pfam profile PF00083: major
facilitator superfamily protein; contains TIGRfam
TIGR00879: Sugar transporter
Length = 488
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = -3
Query: 416 ILAYVGFNTLGFFVLPGLMIGELLPTKVRGLCG 318
++A V +LG +P L++ E+LP ++GL G
Sbjct: 392 VVAMVISCSLGMGPIPWLIMSEILPVNIKGLAG 424
>At2g18540.1 68415.m02160 cupin family protein contains Pfam profile
PF00190: Cupin
Length = 707
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/52 (25%), Positives = 25/52 (48%)
Frame = +3
Query: 369 RQYKES*RIEANVCEDQDWRRDACTGALREQGGQRQSTDRSSNARNQTSVRR 524
RQ KE +E + E+Q+ +R+ REQ Q++ + + + R+
Sbjct: 583 RQRKEREEVERKIREEQERKREEEMAKRREQERQKKEREEMERKKREEEARK 634
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,759,230
Number of Sequences: 28952
Number of extensions: 324653
Number of successful extensions: 812
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 787
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 812
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2129873112
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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