Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0435.Seq
         (585 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0613 - 25509044-25509118,25509256-25511275,25511632-25512467     27   8.3  
03_02_0514 + 9038606-9039790,9040211-9040432,9040548-9040655,904...    27   8.3  

>11_06_0613 - 25509044-25509118,25509256-25511275,25511632-25512467
          Length = 976

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 12/43 (27%), Positives = 23/43 (53%)
 Frame = -3

Query: 541 NCTFTDIYTIKLSSXIILVQSAKM*NSCNTKLPHDFIKLEMIQ 413
           NC F + Y +K    +  ++  ++   C TKLP++   L+ +Q
Sbjct: 597 NCHFEESYHLKHLGNLFHLRYLRLHCGCITKLPNEIGNLQFLQ 639


>03_02_0514 +
           9038606-9039790,9040211-9040432,9040548-9040655,
           9041608-9041802,9041905-9042153,9042525-9042672,
           9042673-9042779,9043311-9043475,9044506-9045948
          Length = 1273

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +1

Query: 1   VNSHVSSNLLNYRDSTTFSIEIISP 75
           V S  SSNLLN +D  +F +E + P
Sbjct: 493 VGSVTSSNLLNPQDDLSFKLEYVHP 517


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,095,152
Number of Sequences: 37544
Number of extensions: 149145
Number of successful extensions: 172
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 170
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 172
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1376330256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)