Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0431.Seq
         (829 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    25   0.97 
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    24   1.7  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    23   2.2  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   2.2  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   2.2  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   2.2  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   2.2  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   3.9  
AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase l...    22   5.2  

>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 24.6 bits (51), Expect = 0.97
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = -3

Query: 587 KPQGIRFVVASGNQYYQLISFFPEIAMK 504
           KP+G+  ++   + +  ++S FP+ A K
Sbjct: 179 KPRGVLNIIPKQDNFRAIVSIFPDSARK 206


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -3

Query: 455 MFLMASYRRMRLLLSWNISDAPGSGNYCL 369
           M +  S RRM   L+  I+D   S +YCL
Sbjct: 39  MIITKSGRRMFPALNLKITDLDPSADYCL 67


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 17/67 (25%), Positives = 23/67 (34%)
 Frame = +3

Query: 453 HLCLRSLPSRRFQPQRQFHSNFREERDQLIILIPAGDYKANSLWLSFADTEP*TAHGYRF 632
           H+ +R     R +P R FH      R     +IP    K   + L            Y  
Sbjct: 245 HIPIRQCDDHRDRPPRHFHEEHDTRRASSRGIIPRAKIKTVKMTLVIVFVFVLCWSPYIV 304

Query: 633 FDRLRKY 653
           FD L+ Y
Sbjct: 305 FDLLQVY 311


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = -3

Query: 104  LRQLQKLWGIDDSE 63
            ++QLQKL GIDD +
Sbjct: 1387 VKQLQKLQGIDDGD 1400


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = -3

Query: 104  LRQLQKLWGIDDSE 63
            ++QLQKL GIDD +
Sbjct: 1387 VKQLQKLQGIDDGD 1400


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = -3

Query: 104  LRQLQKLWGIDDSE 63
            ++QLQKL GIDD +
Sbjct: 1387 VKQLQKLQGIDDGD 1400


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = -3

Query: 104  LRQLQKLWGIDDSE 63
            ++QLQKL GIDD +
Sbjct: 1387 VKQLQKLQGIDDGD 1400


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 150 RQHRSDYPRRT*SQWPSP 97
           R+ R+D+  +   QWPSP
Sbjct: 263 RKPRTDFKPQVLPQWPSP 280


>AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase like
           protein E3 protein.
          Length = 138

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +1

Query: 472 YPAAVFSHKGNFIAISGKKEI 534
           YP  V+ H G FI  SG  +I
Sbjct: 73  YPVLVWIHGGYFIFGSGNDDI 93


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,487
Number of Sequences: 336
Number of extensions: 4446
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22725411
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)