Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0424.Seq
         (626 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY333285-1|AAR03490.1| 1943|Homo sapiens truncated transient rec...    31   4.4  
AY333284-1|AAR03489.1| 2017|Homo sapiens transient receptor pote...    31   4.4  
AY333283-1|AAR03488.1| 2017|Homo sapiens transient receptor pote...    31   4.4  
AY333282-1|AAR03487.1| 2022|Homo sapiens transient receptor pote...    31   4.4  
AL354795-2|CAH70894.1| 2022|Homo sapiens transient receptor pote...    31   4.4  
AL354795-1|CAH70893.1| 1133|Homo sapiens transient receptor pote...    31   4.4  
AK026281-1|BAB15429.1| 1133|Homo sapiens protein ( Homo sapiens ...    31   4.4  
AF448232-1|AAM21562.1| 2022|Homo sapiens LTRPC6 channel kinase 2...    31   4.4  
AF350881-1|AAK31202.2| 2022|Homo sapiens channel-kinase 2 protein.     31   4.4  
M73780-1|AAA36034.1|  769|Homo sapiens integrin beta-8 subunit p...    30   5.8  
AC004130-1|AAQ96845.1|  769|Homo sapiens unknown protein.              30   5.8  

>AY333285-1|AAR03490.1| 1943|Homo sapiens truncated transient receptor
            potential cation channel subfamily M member 6 vari
            protein.
          Length = 1943

 Score = 30.7 bits (66), Expect = 4.4
 Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
 Frame = +3

Query: 495  RFRQEKLNVVNT--ETNISQTEIKVTELTQELKPVNEKLSAIK 617
            ++  EK+  VN   E  I  T  +VTE+  +LK +NEK+S IK
Sbjct: 1156 KYFHEKMEDVNCSCEERIRVTSERVTEMYFQLKEMNEKVSFIK 1198


>AY333284-1|AAR03489.1| 2017|Homo sapiens transient receptor potential
            cation channel subfamily M member 6 variant c protein.
          Length = 2017

 Score = 30.7 bits (66), Expect = 4.4
 Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
 Frame = +3

Query: 495  RFRQEKLNVVNT--ETNISQTEIKVTELTQELKPVNEKLSAIK 617
            ++  EK+  VN   E  I  T  +VTE+  +LK +NEK+S IK
Sbjct: 1151 KYFHEKMEDVNCSCEERIRVTSERVTEMYFQLKEMNEKVSFIK 1193


>AY333283-1|AAR03488.1| 2017|Homo sapiens transient receptor potential
            cation channel subfamily M member 6 variant b protein.
          Length = 2017

 Score = 30.7 bits (66), Expect = 4.4
 Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
 Frame = +3

Query: 495  RFRQEKLNVVNT--ETNISQTEIKVTELTQELKPVNEKLSAIK 617
            ++  EK+  VN   E  I  T  +VTE+  +LK +NEK+S IK
Sbjct: 1151 KYFHEKMEDVNCSCEERIRVTSERVTEMYFQLKEMNEKVSFIK 1193


>AY333282-1|AAR03487.1| 2022|Homo sapiens transient receptor potential
            cation channel subfamily M member 6 variant a protein.
          Length = 2022

 Score = 30.7 bits (66), Expect = 4.4
 Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
 Frame = +3

Query: 495  RFRQEKLNVVNT--ETNISQTEIKVTELTQELKPVNEKLSAIK 617
            ++  EK+  VN   E  I  T  +VTE+  +LK +NEK+S IK
Sbjct: 1156 KYFHEKMEDVNCSCEERIRVTSERVTEMYFQLKEMNEKVSFIK 1198


>AL354795-2|CAH70894.1| 2022|Homo sapiens transient receptor potential
            cation channel, subfamily M, member 6 protein.
          Length = 2022

 Score = 30.7 bits (66), Expect = 4.4
 Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
 Frame = +3

Query: 495  RFRQEKLNVVNT--ETNISQTEIKVTELTQELKPVNEKLSAIK 617
            ++  EK+  VN   E  I  T  +VTE+  +LK +NEK+S IK
Sbjct: 1156 KYFHEKMEDVNCSCEERIRVTSERVTEMYFQLKEMNEKVSFIK 1198


>AL354795-1|CAH70893.1| 1133|Homo sapiens transient receptor
           potential cation channel, subfamily M, member 6 protein.
          Length = 1133

 Score = 30.7 bits (66), Expect = 4.4
 Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
 Frame = +3

Query: 495 RFRQEKLNVVNT--ETNISQTEIKVTELTQELKPVNEKLSAIK 617
           ++  EK+  VN   E  I  T  +VTE+  +LK +NEK+S IK
Sbjct: 819 KYFHEKMEDVNCSCEERIRVTSERVTEMYFQLKEMNEKVSFIK 861


>AK026281-1|BAB15429.1| 1133|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ22628 fis, clone HSI06177. ).
          Length = 1133

 Score = 30.7 bits (66), Expect = 4.4
 Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
 Frame = +3

Query: 495 RFRQEKLNVVNT--ETNISQTEIKVTELTQELKPVNEKLSAIK 617
           ++  EK+  VN   E  I  T  +VTE+  +LK +NEK+S IK
Sbjct: 819 KYFHEKMEDVNCSCEERIRVTSERVTEMYFQLKEMNEKVSFIK 861


>AF448232-1|AAM21562.1| 2022|Homo sapiens LTRPC6 channel kinase 2
            protein.
          Length = 2022

 Score = 30.7 bits (66), Expect = 4.4
 Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
 Frame = +3

Query: 495  RFRQEKLNVVNT--ETNISQTEIKVTELTQELKPVNEKLSAIK 617
            ++  EK+  VN   E  I  T  +VTE+  +LK +NEK+S IK
Sbjct: 1156 KYFHEKMEDVNCSCEERIRVTSERVTEMYFQLKEMNEKVSFIK 1198


>AF350881-1|AAK31202.2| 2022|Homo sapiens channel-kinase 2 protein.
          Length = 2022

 Score = 30.7 bits (66), Expect = 4.4
 Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
 Frame = +3

Query: 495  RFRQEKLNVVNT--ETNISQTEIKVTELTQELKPVNEKLSAIK 617
            ++  EK+  VN   E  I  T  +VTE+  +LK +NEK+S IK
Sbjct: 1156 KYFHEKMEDVNCSCEERIRVTSERVTEMYFQLKEMNEKVSFIK 1198


>M73780-1|AAA36034.1|  769|Homo sapiens integrin beta-8 subunit
           protein.
          Length = 769

 Score = 30.3 bits (65), Expect = 5.8
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -2

Query: 298 SCICAPRCRCTHPRCTDTFAEH 233
           +C+C  RC CT PR    F EH
Sbjct: 606 TCVCG-RCECTDPRSIGRFCEH 626


>AC004130-1|AAQ96845.1|  769|Homo sapiens unknown protein.
          Length = 769

 Score = 30.3 bits (65), Expect = 5.8
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -2

Query: 298 SCICAPRCRCTHPRCTDTFAEH 233
           +C+C  RC CT PR    F EH
Sbjct: 606 TCVCG-RCECTDPRSIGRFCEH 626


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,882,524
Number of Sequences: 237096
Number of extensions: 1599348
Number of successful extensions: 2878
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2801
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2878
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6804036910
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)