Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0419.Seq
         (565 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021372-1|AAX33520.1| 2286|Drosophila melanogaster LP05745p pro...    29   3.3  
AE014134-3630|EAA46011.1| 2286|Drosophila melanogaster CG18140-P...    29   3.3  
AY095099-1|AAM11427.1|  984|Drosophila melanogaster SD09402p pro...    29   5.7  
AE014296-288|AAF47514.1|  985|Drosophila melanogaster CG7879-PB,...    29   5.7  
AE014296-287|AAF47513.1|  985|Drosophila melanogaster CG7879-PA,...    29   5.7  

>BT021372-1|AAX33520.1| 2286|Drosophila melanogaster LP05745p
           protein.
          Length = 2286

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
 Frame = +1

Query: 124 RNNFSIRYWSWNYRGCWHQTCP--PIVPR*NI*SVL 225
           R+ FS  +  WNY  CW   C   P+  R N+  +L
Sbjct: 327 RHGFSGLHLDWNYPKCWQSDCSRGPVTDRPNLTKLL 362


>AE014134-3630|EAA46011.1| 2286|Drosophila melanogaster CG18140-PA
           protein.
          Length = 2286

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
 Frame = +1

Query: 124 RNNFSIRYWSWNYRGCWHQTCP--PIVPR*NI*SVL 225
           R+ FS  +  WNY  CW   C   P+  R N+  +L
Sbjct: 327 RHGFSGLHLDWNYPKCWQSDCSRGPVTDRPNLTKLL 362


>AY095099-1|AAM11427.1|  984|Drosophila melanogaster SD09402p protein.
          Length = 984

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 16/60 (26%), Positives = 29/60 (48%)
 Frame = +1

Query: 229  PITRPRKSPYRYFSSLPPRAGSG*FARLLPSLDVVAVSQAPSPESNPDSPLPVTTMVVAE 408
            P++  R+      S+ P +     FAR  P L   ++S +   +  P SP+PV T ++ +
Sbjct: 842  PLSLEREDNSSTSSNAPVKQHFNPFARPDPPLSSSSLSPSNQGQVKPTSPVPVPTSIIPD 901


>AE014296-288|AAF47514.1|  985|Drosophila melanogaster CG7879-PB,
            isoform B protein.
          Length = 985

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 16/60 (26%), Positives = 29/60 (48%)
 Frame = +1

Query: 229  PITRPRKSPYRYFSSLPPRAGSG*FARLLPSLDVVAVSQAPSPESNPDSPLPVTTMVVAE 408
            P++  R+      S+ P +     FAR  P L   ++S +   +  P SP+PV T ++ +
Sbjct: 843  PLSLEREDNSSTSSNAPVKQHFNPFARPDPPLSSSSLSPSNQGQVKPTSPVPVPTSIIPD 902


>AE014296-287|AAF47513.1|  985|Drosophila melanogaster CG7879-PA,
            isoform A protein.
          Length = 985

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 16/60 (26%), Positives = 29/60 (48%)
 Frame = +1

Query: 229  PITRPRKSPYRYFSSLPPRAGSG*FARLLPSLDVVAVSQAPSPESNPDSPLPVTTMVVAE 408
            P++  R+      S+ P +     FAR  P L   ++S +   +  P SP+PV T ++ +
Sbjct: 843  PLSLEREDNSSTSSNAPVKQHFNPFARPDPPLSSSSLSPSNQGQVKPTSPVPVPTSIIPD 902


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,694,846
Number of Sequences: 53049
Number of extensions: 501811
Number of successful extensions: 1263
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1262
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2193288294
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)