Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0416.Seq
         (458 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    25   0.96 
AY825864-1|AAV70427.1|  161|Anopheles gambiae voltage gated sodi...    25   1.3  
AY825863-1|AAV70426.1|  161|Anopheles gambiae voltage gated sodi...    25   1.3  
EF519470-2|ABP73550.1|  177|Anopheles gambiae CTL4 protein.            24   2.9  
AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulf...    23   6.8  
AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulf...    23   6.8  
AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reduct...    23   6.8  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    22   9.0  

>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 25.4 bits (53), Expect = 0.96
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +3

Query: 156 GSHCIKYRLF*LGLQCLRFEKEMYSIAETHWNFPST 263
           G  CI+ +L   G +  RF+ EM  + E  W F ST
Sbjct: 4   GKFCIE-KLRSGGYETWRFKVEMLLVRENLWKFEST 38


>AY825864-1|AAV70427.1|  161|Anopheles gambiae voltage gated sodium
           channel protein.
          Length = 161

 Score = 25.0 bits (52), Expect = 1.3
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -2

Query: 334 NCGSQPISITNIEAIL*CSILMI 266
           NCGS  ISIT + A L  S L++
Sbjct: 8   NCGSSTISITYLLAYLVISFLIV 30


>AY825863-1|AAV70426.1|  161|Anopheles gambiae voltage gated sodium
           channel protein.
          Length = 161

 Score = 25.0 bits (52), Expect = 1.3
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -2

Query: 334 NCGSQPISITNIEAIL*CSILMI 266
           NCGS  ISIT + A L  S L++
Sbjct: 8   NCGSSTISITYLLAYLVISFLIV 30


>EF519470-2|ABP73550.1|  177|Anopheles gambiae CTL4 protein.
          Length = 177

 Score = 23.8 bits (49), Expect = 2.9
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = -2

Query: 379 YISHNIKRTF*IGFSNCGSQPISITNIEAIL*CSILMIFVDG 254
           Y + N++  +    S C S  +SI  I+    C +L + +DG
Sbjct: 52  YTTPNLRLNWFDAVSYCSSIGMSIATIKDTNECQLLQLHLDG 93


>AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 529

 Score = 22.6 bits (46), Expect = 6.8
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 244 TGTFHPRRSLKYCIIK 291
           T  F P+RS++YC +K
Sbjct: 439 TEFFVPQRSVRYCYLK 454


>AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 505

 Score = 22.6 bits (46), Expect = 6.8
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 244 TGTFHPRRSLKYCIIK 291
           T  F P+RS++YC +K
Sbjct: 415 TEFFVPQRSVRYCYLK 430


>AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reductase
           protein.
          Length = 502

 Score = 22.6 bits (46), Expect = 6.8
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 244 TGTFHPRRSLKYCIIK 291
           T  F P+RS++YC +K
Sbjct: 412 TEFFVPQRSVRYCYLK 427


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 22.2 bits (45), Expect = 9.0
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = +3

Query: 51   LDGLK*IVMNNNEDESFLTIKINAS 125
            LDG   I+++++EDE  L I ++ S
Sbjct: 1691 LDGTTTIIIHDSEDEKDLDIILSGS 1715


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 412,725
Number of Sequences: 2352
Number of extensions: 7268
Number of successful extensions: 58
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 58
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 39544623
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)