Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0416.Seq
         (458 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY219711-1|AAP21093.1| 2595|Homo sapiens ABCA12 transporter subf...    30   3.3  
AY033486-1|AAK54355.1| 2277|Homo sapiens ATP-binding cassette tr...    30   3.3  
AL080207-1|CAB45776.1|  196|Homo sapiens hypothetical protein pr...    30   3.3  
AF418105-1|AAN40735.1| 2347|Homo sapiens ATP-binding cassette tr...    30   3.3  
AC114780-1|AAY24230.1|  182|Homo sapiens unknown protein.              30   3.3  

>AY219711-1|AAP21093.1| 2595|Homo sapiens ABCA12 transporter subfamily
            A protein.
          Length = 2595

 Score = 30.3 bits (65), Expect = 3.3
 Identities = 13/31 (41%), Positives = 22/31 (70%)
 Frame = -2

Query: 313  SITNIEAIL*CSILMIFVDGKFQCVSAIEYI 221
            S+   EA+  C+ L I V+GKFQC+ ++++I
Sbjct: 2448 SMEECEAL--CTRLAIMVNGKFQCIGSLQHI 2476


>AY033486-1|AAK54355.1| 2277|Homo sapiens ATP-binding cassette
            transporter family A member 12 protein.
          Length = 2277

 Score = 30.3 bits (65), Expect = 3.3
 Identities = 13/31 (41%), Positives = 22/31 (70%)
 Frame = -2

Query: 313  SITNIEAIL*CSILMIFVDGKFQCVSAIEYI 221
            S+   EA+  C+ L I V+GKFQC+ ++++I
Sbjct: 2130 SMEECEAL--CTRLAIMVNGKFQCIGSLQHI 2158


>AL080207-1|CAB45776.1|  196|Homo sapiens hypothetical protein
           protein.
          Length = 196

 Score = 30.3 bits (65), Expect = 3.3
 Identities = 13/31 (41%), Positives = 22/31 (70%)
 Frame = -2

Query: 313 SITNIEAIL*CSILMIFVDGKFQCVSAIEYI 221
           S+   EA+  C+ L I V+GKFQC+ ++++I
Sbjct: 49  SMEECEAL--CTRLAIMVNGKFQCIGSLQHI 77


>AF418105-1|AAN40735.1| 2347|Homo sapiens ATP-binding cassette
            transporter family A member 12 protein.
          Length = 2347

 Score = 30.3 bits (65), Expect = 3.3
 Identities = 13/31 (41%), Positives = 22/31 (70%)
 Frame = -2

Query: 313  SITNIEAIL*CSILMIFVDGKFQCVSAIEYI 221
            S+   EA+  C+ L I V+GKFQC+ ++++I
Sbjct: 2200 SMEECEAL--CTRLAIMVNGKFQCIGSLQHI 2228


>AC114780-1|AAY24230.1|  182|Homo sapiens unknown protein.
          Length = 182

 Score = 30.3 bits (65), Expect = 3.3
 Identities = 13/31 (41%), Positives = 22/31 (70%)
 Frame = -2

Query: 313 SITNIEAIL*CSILMIFVDGKFQCVSAIEYI 221
           S+   EA+  C+ L I V+GKFQC+ ++++I
Sbjct: 35  SMEECEAL--CTRLAIMVNGKFQCIGSLQHI 63


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,178,268
Number of Sequences: 237096
Number of extensions: 959813
Number of successful extensions: 937
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 915
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 937
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3872123864
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)