BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ps4M0416.Seq (458 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z83244-7|CAB05829.1| 318|Caenorhabditis elegans Hypothetical pr... 27 5.0 U50184-1|ABJ99064.1| 1540|Caenorhabditis elegans Hypothetical pr... 27 5.0 >Z83244-7|CAB05829.1| 318|Caenorhabditis elegans Hypothetical protein W06F12.3 protein. Length = 318 Score = 27.5 bits (58), Expect = 5.0 Identities = 14/53 (26%), Positives = 28/53 (52%), Gaps = 1/53 (1%) Frame = +3 Query: 189 LGLQCLRFEKEMYSIAETHWNF-PSTKIIKILHYKMASIFVIDMGCEPQLENP 344 +G+QCL K+++ + H + PS + I +K ++++D G Q+ P Sbjct: 138 VGIQCLEGLKQIHELGYIHRDIKPSNICVGIGEHKRV-LYIVDFGMARQIRFP 189 >U50184-1|ABJ99064.1| 1540|Caenorhabditis elegans Hypothetical protein W03A3.2 protein. Length = 1540 Score = 27.5 bits (58), Expect = 5.0 Identities = 14/57 (24%), Positives = 31/57 (54%), Gaps = 1/57 (1%) Frame = +3 Query: 198 QCLRFEKEMYSIAETHWNFPST-KIIKILHYKMASIFVIDMGCEPQLENPI*NVLLI 365 Q E+ ++ +A +N S+ ++ +L Y++ I+ GC+P+L + N L++ Sbjct: 1185 QIENLEENIWRLAYGKFNIHSSNEVANVLFYRLGLIYPETSGCKPKLRHLPTNKLIL 1241 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 9,006,412 Number of Sequences: 27780 Number of extensions: 155853 Number of successful extensions: 242 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 236 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 242 length of database: 12,740,198 effective HSP length: 75 effective length of database: 10,656,698 effective search space used: 820565746 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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