Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0415.Seq
(900 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1; ... 102 1e-20
UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular organ... 102 1e-20
UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: L... 102 1e-20
UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep: Bet... 102 1e-20
UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3; Eukaryo... 77 5e-13
UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:... 67 7e-10
UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1; ... 54 4e-06
UniRef50_P06219 Cluster: Beta-galactosidase; n=11; Gammaproteoba... 54 5e-06
UniRef50_P81650 Cluster: Beta-galactosidase; n=26; Gammaproteoba... 44 0.004
UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia sp... 41 0.049
UniRef50_A6FJQ2 Cluster: 50S ribosomal protein L5; n=8; Bacteria... 40 0.11
UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ... 38 0.26
UniRef50_Q48727 Cluster: Beta-galactosidase; n=3; Lactococcus la... 36 1.4
UniRef50_A0UVE2 Cluster: Glycoside hydrolase family 2, TIM barre... 36 1.9
UniRef50_Q9JN59 Cluster: Beta-galactosidase; n=16; Vibrio choler... 34 4.3
UniRef50_Q15XN9 Cluster: Glycoside hydrolase family 2, TIM barre... 34 5.7
UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1; ... 34 5.7
UniRef50_Q5DC94 Cluster: SJCHGC09076 protein; n=1; Schistosoma j... 33 7.5
>UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1;
Erwinia amylovora|Rep: Putative uncharacterized protein
- Erwinia amylovora (Fire blight bacteria)
Length = 123
Score = 102 bits (244), Expect = 1e-20
Identities = 46/46 (100%), Positives = 46/46 (100%)
Frame = +1
Query: 346 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR 483
LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR
Sbjct: 68 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR 113
>UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular
organisms|Rep: LacZ-alpha peptide - Escherichia coli
Length = 90
Score = 102 bits (244), Expect = 1e-20
Identities = 46/46 (100%), Positives = 46/46 (100%)
Frame = +1
Query: 346 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR 483
LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR
Sbjct: 22 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR 67
>UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: LacZ
protein - Phage M13mp18
Length = 102
Score = 102 bits (244), Expect = 1e-20
Identities = 46/46 (100%), Positives = 46/46 (100%)
Frame = +1
Query: 346 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR 483
LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR
Sbjct: 26 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR 71
>UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep:
Beta-galactosidase - Escherichia coli (strain K12)
Length = 1024
Score = 102 bits (244), Expect = 1e-20
Identities = 46/46 (100%), Positives = 46/46 (100%)
Frame = +1
Query: 346 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR 483
LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR
Sbjct: 8 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR 53
>UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3;
Eukaryota|Rep: beta-galactosidase - Entamoeba
histolytica HM-1:IMSS
Length = 86
Score = 77.4 bits (182), Expect = 5e-13
Identities = 39/55 (70%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Frame = +2
Query: 344 HWPSFYNVVTGKTLALPNLIALQHIPLSPAGVIAKRPAPIALPNS--CAXEWRMA 502
HWPSFYNVVTGKTLALPNLIALQHIPLSPAGVI++ A P+ + +WRMA
Sbjct: 5 HWPSFYNVVTGKTLALPNLIALQHIPLSPAGVISEE-ARTDRPSQQLRSLKWRMA 58
>UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:
Beta-galactosidase - Yersinia pseudotuberculosis
Length = 1066
Score = 66.9 bits (156), Expect = 7e-10
Identities = 28/44 (63%), Positives = 33/44 (75%)
Frame = +1
Query: 346 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQ 477
L +L RRDWENP +TQ +RL AHPPF SWR+ E A+ DRPS Q
Sbjct: 15 LPQILSRRDWENPQITQYHRLEAHPPFHSWRDVESAQKDRPSPQ 58
>UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1;
Enterobacter sakazakii ATCC BAA-894|Rep: Putative
uncharacterized protein - Enterobacter sakazakii ATCC
BAA-894
Length = 1043
Score = 54.4 bits (125), Expect = 4e-06
Identities = 20/42 (47%), Positives = 28/42 (66%)
Frame = +1
Query: 346 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPS 471
LA +L R DW+NP +T +NRL +H P WR+++ AR PS
Sbjct: 18 LATILARNDWQNPAITSVNRLPSHTPLHGWRDADRARRGEPS 59
>UniRef50_P06219 Cluster: Beta-galactosidase; n=11;
Gammaproteobacteria|Rep: Beta-galactosidase - Klebsiella
pneumoniae
Length = 1034
Score = 54.0 bits (124), Expect = 5e-06
Identities = 24/43 (55%), Positives = 28/43 (65%)
Frame = +1
Query: 355 VLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR 483
VL R DW N +T LNRL AHP FASWR+ AR + PS + R
Sbjct: 17 VLAREDWHNQTITHLNRLPAHPVFASWRDELAARDNLPSSRRR 59
>UniRef50_P81650 Cluster: Beta-galactosidase; n=26;
Gammaproteobacteria|Rep: Beta-galactosidase -
Pseudoalteromonas haloplanktis (Alteromonas
haloplanktis)
Length = 1039
Score = 44.4 bits (100), Expect = 0.004
Identities = 17/41 (41%), Positives = 27/41 (65%)
Frame = +1
Query: 355 VLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQ 477
++ RRDWENP Q+N++ AH P ++ E+AR + SQ+
Sbjct: 7 IINRRDWENPITVQVNQVKAHSPLNGFKTIEDARENTQSQK 47
>UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia
spumigena CCY 9414|Rep: Beta-D-galactosidase - Nodularia
spumigena CCY 9414
Length = 72
Score = 40.7 bits (91), Expect = 0.049
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 433 WRNSEEARTDRPSQQLR 483
WRNSEEARTDRPSQQLR
Sbjct: 47 WRNSEEARTDRPSQQLR 63
>UniRef50_A6FJQ2 Cluster: 50S ribosomal protein L5; n=8;
Bacteria|Rep: 50S ribosomal protein L5 - Moritella sp.
PE36
Length = 45
Score = 39.5 bits (88), Expect = 0.11
Identities = 22/29 (75%), Positives = 23/29 (79%)
Frame = -1
Query: 504 FAIRHSXAQLLGRAIGAGLFAITPAGERG 418
FAI+ AQLLGRAIGAGLFAITP E G
Sbjct: 12 FAIQ--AAQLLGRAIGAGLFAITPEFELG 38
>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium berghei
Length = 275
Score = 38.3 bits (85), Expect = 0.26
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +2
Query: 284 KKTRGGARYPIRPIVSRIT 340
++ RGGARYPIRPIVSRIT
Sbjct: 257 RRPRGGARYPIRPIVSRIT 275
>UniRef50_Q48727 Cluster: Beta-galactosidase; n=3; Lactococcus
lactis|Rep: Beta-galactosidase - Lactococcus lactis
subsp. lactis (Streptococcus lactis)
Length = 998
Score = 35.9 bits (79), Expect = 1.4
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +1
Query: 355 VLQRRDWENPGVTQLNRLAAHPP 423
VL+R+DWENP V+ NRL H P
Sbjct: 9 VLERKDWENPVVSNWNRLPMHTP 31
>UniRef50_A0UVE2 Cluster: Glycoside hydrolase family 2, TIM barrel;
n=1; Clostridium cellulolyticum H10|Rep: Glycoside
hydrolase family 2, TIM barrel - Clostridium
cellulolyticum H10
Length = 1033
Score = 35.5 bits (78), Expect = 1.9
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +1
Query: 367 RDWENPGVTQLNRLAAHPPFASWRNSEEA 453
R+WEN +TQ+NR H P+ ++ + E+A
Sbjct: 3 REWENQYITQINRYPMHSPYGAYESVEQA 31
>UniRef50_Q9JN59 Cluster: Beta-galactosidase; n=16; Vibrio
cholerae|Rep: Beta-galactosidase - Vibrio cholerae
Length = 56
Score = 34.3 bits (75), Expect = 4.3
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +1
Query: 355 VLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTD 462
+L +DW+NP + + + H P S+R +EAR D
Sbjct: 7 ILLSQDWQNPHIVKWHCRTPHVPLHSYRTEQEARLD 42
>UniRef50_Q15XN9 Cluster: Glycoside hydrolase family 2, TIM barrel
precursor; n=1; Pseudoalteromonas atlantica T6c|Rep:
Glycoside hydrolase family 2, TIM barrel precursor -
Pseudoalteromonas atlantica (strain T6c / BAA-1087)
Length = 1079
Score = 33.9 bits (74), Expect = 5.7
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +1
Query: 364 RRDWENPGVTQLNRLAAHPPFASWRNSEEART 459
+ DWENP V Q+NRL A S+ E+A T
Sbjct: 31 KNDWENPDVIQINRLPARATSYSFDTPEQALT 62
>UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1;
uncultured bacterium|Rep: Non-ribosomal peptide
synthetase - uncultured bacterium
Length = 338
Score = 33.9 bits (74), Expect = 5.7
Identities = 18/35 (51%), Positives = 18/35 (51%)
Frame = -2
Query: 395 WVTPGFSQSRRCKTTASEL*YDSL*GELGTGPPLE 291
W GF C YDSL GELGTGPPLE
Sbjct: 260 WSKTGFRPF--CLEAGRRAYYDSLYGELGTGPPLE 292
>UniRef50_Q5DC94 Cluster: SJCHGC09076 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09076 protein - Schistosoma
japonicum (Blood fluke)
Length = 109
Score = 33.5 bits (73), Expect = 7.5
Identities = 24/66 (36%), Positives = 29/66 (43%)
Frame = +2
Query: 296 GGARYPIRPIVSRITIHWPSFYNVVTGKTLALPNLIALQHIPLSPAGVIAKRPAPIALPN 475
GGAR PI P I +F GK P L L+ +PL P G K+ AP PN
Sbjct: 39 GGARDPISPKGGPNKISGAAFLKRREGKNPGCPQLNPLEALPLFPGGEKTKK-AP---PN 94
Query: 476 SCAXEW 493
+ W
Sbjct: 95 RLSKNW 100
Score = 33.1 bits (72), Expect = 9.9
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +1
Query: 349 AVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQ 474
A L+RR+ +NPG QLN L A P F +++A +R S+
Sbjct: 57 AAFLKRREGKNPGCPQLNPLEALPLFPGGEKTKKAPPNRLSK 98
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 781,842,021
Number of Sequences: 1657284
Number of extensions: 15122207
Number of successful extensions: 28244
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 27512
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28239
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 81571813589
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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