Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0410.Seq
(914 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: L... 98 3e-19
UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep: Bet... 98 3e-19
UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular organ... 97 7e-19
UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1; ... 96 1e-18
UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3; Eukaryo... 73 8e-12
UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:... 60 6e-08
UniRef50_P06219 Cluster: Beta-galactosidase; n=11; Gammaproteoba... 56 2e-06
UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1; ... 52 3e-05
UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia sp... 43 0.013
UniRef50_A6FJQ2 Cluster: 50S ribosomal protein L5; n=8; Bacteria... 39 0.15
UniRef50_P81650 Cluster: Beta-galactosidase; n=26; Gammaproteoba... 39 0.15
UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ... 37 0.62
UniRef50_Q3SEW6 Cluster: Outer membrane chemotaxis MotB protein;... 36 1.4
UniRef50_Q5DC94 Cluster: SJCHGC09076 protein; n=1; Schistosoma j... 34 5.8
UniRef50_Q9FZK7 Cluster: F17L21.7; n=10; core eudicotyledons|Rep... 33 7.7
>UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: LacZ
protein - Phage M13mp18
Length = 102
Score = 97.9 bits (233), Expect = 3e-19
Identities = 47/52 (90%), Positives = 47/52 (90%), Gaps = 2/52 (3%)
Frame = +1
Query: 478 LAVVLQRRDWETLGVTQLNRLAAHPPFASWRNSEEARTDSPSQQLRSL--EW 627
LAVVLQRRDWE GVTQLNRLAAHPPFASWRNSEEARTD PSQQLRSL EW
Sbjct: 26 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEW 77
>UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep:
Beta-galactosidase - Escherichia coli (strain K12)
Length = 1024
Score = 97.9 bits (233), Expect = 3e-19
Identities = 47/52 (90%), Positives = 47/52 (90%), Gaps = 2/52 (3%)
Frame = +1
Query: 478 LAVVLQRRDWETLGVTQLNRLAAHPPFASWRNSEEARTDSPSQQLRSL--EW 627
LAVVLQRRDWE GVTQLNRLAAHPPFASWRNSEEARTD PSQQLRSL EW
Sbjct: 8 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEW 59
>UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular
organisms|Rep: LacZ-alpha peptide - Escherichia coli
Length = 90
Score = 96.7 bits (230), Expect = 7e-19
Identities = 45/48 (93%), Positives = 45/48 (93%)
Frame = +1
Query: 478 LAVVLQRRDWETLGVTQLNRLAAHPPFASWRNSEEARTDSPSQQLRSL 621
LAVVLQRRDWE GVTQLNRLAAHPPFASWRNSEEARTD PSQQLRSL
Sbjct: 22 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSL 69
>UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1;
Erwinia amylovora|Rep: Putative uncharacterized protein
- Erwinia amylovora (Fire blight bacteria)
Length = 123
Score = 95.9 bits (228), Expect = 1e-18
Identities = 46/52 (88%), Positives = 46/52 (88%), Gaps = 2/52 (3%)
Frame = +1
Query: 478 LAVVLQRRDWETLGVTQLNRLAAHPPFASWRNSEEARTDSPSQQLRSL--EW 627
LAVVLQRRDWE GVTQLNRLAAHPPFASWRNSEEARTD PSQQLR L EW
Sbjct: 68 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRXLNGEW 119
>UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3;
Eukaryota|Rep: beta-galactosidase - Entamoeba
histolytica HM-1:IMSS
Length = 86
Score = 73.3 bits (172), Expect = 8e-12
Identities = 35/53 (66%), Positives = 38/53 (71%)
Frame = +2
Query: 476 HWPSFYNVVTGKPWALPNLIALQHIPLSPAGVIAKRPAPIRLPNSCAALNGRM 634
HWPSFYNVVTGK ALPNLIALQHIPLSPAGVI++ R +L RM
Sbjct: 5 HWPSFYNVVTGKTLALPNLIALQHIPLSPAGVISEEARTDRPSQQLRSLKWRM 57
>UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:
Beta-galactosidase - Yersinia pseudotuberculosis
Length = 1066
Score = 60.5 bits (140), Expect = 6e-08
Identities = 31/63 (49%), Positives = 40/63 (63%)
Frame = +1
Query: 478 LAVVLQRRDWETLGVTQLNRLAAHPPFASWRNSEEARTDSPSQQLRSLEWANGQIVSVKY 657
L +L RRDWE +TQ +RL AHPPF SWR+ E A+ D PS Q ++L NG + S Y
Sbjct: 15 LPQILSRRDWENPQITQYHRLEAHPPFHSWRDVESAQKDRPSPQQQTL---NG-LWSFSY 70
Query: 658 FVK 666
F +
Sbjct: 71 FTQ 73
>UniRef50_P06219 Cluster: Beta-galactosidase; n=11;
Gammaproteobacteria|Rep: Beta-galactosidase - Klebsiella
pneumoniae
Length = 1034
Score = 55.6 bits (128), Expect = 2e-06
Identities = 26/63 (41%), Positives = 34/63 (53%)
Frame = +1
Query: 487 VLQRRDWETLGVTQLNRLAAHPPFASWRNSEEARTDSPSQQLRSLEWANGQIVSVKYFVK 666
VL R DW +T LNRL AHP FASWR+ AR + PS + R L+ + +
Sbjct: 17 VLAREDWHNQTITHLNRLPAHPVFASWRDELAARDNLPSSRRRQLDGSGSSLTPAARLPS 76
Query: 667 IRV 675
+RV
Sbjct: 77 MRV 79
>UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1;
Enterobacter sakazakii ATCC BAA-894|Rep: Putative
uncharacterized protein - Enterobacter sakazakii ATCC
BAA-894
Length = 1043
Score = 51.6 bits (118), Expect = 3e-05
Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Frame = +1
Query: 478 LAVVLQRRDWETLGVTQLNRLAAHPPFASWRNSEEARTDSPSQQLRSL--EW 627
LA +L R DW+ +T +NRL +H P WR+++ AR PS + SL EW
Sbjct: 18 LATILARNDWQNPAITSVNRLPSHTPLHGWRDADRARRGEPSDAVLSLDGEW 69
>UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia
spumigena CCY 9414|Rep: Beta-D-galactosidase - Nodularia
spumigena CCY 9414
Length = 72
Score = 42.7 bits (96), Expect = 0.013
Identities = 20/23 (86%), Positives = 20/23 (86%), Gaps = 2/23 (8%)
Frame = +1
Query: 565 WRNSEEARTDSPSQQLRSL--EW 627
WRNSEEARTD PSQQLRSL EW
Sbjct: 47 WRNSEEARTDRPSQQLRSLNGEW 69
>UniRef50_A6FJQ2 Cluster: 50S ribosomal protein L5; n=8;
Bacteria|Rep: 50S ribosomal protein L5 - Moritella sp.
PE36
Length = 45
Score = 39.1 bits (87), Expect = 0.15
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = -3
Query: 621 KAAQLLGRRIGAGLFAITPAGERG 550
+AAQLLGR IGAGLFAITP E G
Sbjct: 15 QAAQLLGRAIGAGLFAITPEFELG 38
>UniRef50_P81650 Cluster: Beta-galactosidase; n=26;
Gammaproteobacteria|Rep: Beta-galactosidase -
Pseudoalteromonas haloplanktis (Alteromonas
haloplanktis)
Length = 1039
Score = 39.1 bits (87), Expect = 0.15
Identities = 20/51 (39%), Positives = 32/51 (62%)
Frame = +1
Query: 487 VLQRRDWETLGVTQLNRLAAHPPFASWRNSEEARTDSPSQQLRSLEWANGQ 639
++ RRDWE Q+N++ AH P ++ E+AR ++ SQ+ +SL NGQ
Sbjct: 7 IINRRDWENPITVQVNQVKAHSPLNGFKTIEDARENTQSQK-KSL---NGQ 53
>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium berghei
Length = 275
Score = 37.1 bits (82), Expect = 0.62
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +2
Query: 425 RGGARYPIRPIVSRIT 472
RGGARYPIRPIVSRIT
Sbjct: 260 RGGARYPIRPIVSRIT 275
>UniRef50_Q3SEW6 Cluster: Outer membrane chemotaxis MotB protein;
n=1; Thiobacillus denitrificans ATCC 25259|Rep: Outer
membrane chemotaxis MotB protein - Thiobacillus
denitrificans (strain ATCC 25259)
Length = 263
Score = 35.9 bits (79), Expect = 1.4
Identities = 21/54 (38%), Positives = 29/54 (53%)
Frame = -1
Query: 641 ICPFAHSRLRNCWEGESVRASSLLRQLAKGGCAARRLSWVTPRVSQSRRCKTTA 480
I P ++S + WE +VRA+S++R LA GG A RL + SQ TA
Sbjct: 180 IVPISNSVFASNWELSAVRATSVVRLLADGGIAPSRLFAIGREASQPIASNGTA 233
>UniRef50_Q5DC94 Cluster: SJCHGC09076 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09076 protein - Schistosoma
japonicum (Blood fluke)
Length = 109
Score = 33.9 bits (74), Expect = 5.8
Identities = 22/58 (37%), Positives = 26/58 (44%)
Frame = +2
Query: 428 GGARYPIRPIVSRITIHWPSFYNVVTGKPWALPNLIALQHIPLSPAGVIAKRPAPIRL 601
GGAR PI P I +F GK P L L+ +PL P G K+ P RL
Sbjct: 39 GGARDPISPKGGPNKISGAAFLKRREGKNPGCPQLNPLEALPLFPGGEKTKKAPPNRL 96
>UniRef50_Q9FZK7 Cluster: F17L21.7; n=10; core eudicotyledons|Rep:
F17L21.7 - Arabidopsis thaliana (Mouse-ear cress)
Length = 1534
Score = 33.5 bits (73), Expect = 7.7
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = -1
Query: 215 QFTERKIPEAASSTTMVADGGSTNMSDECLRSQNVSRAAIRVDTAPVAAATHALPPLADT 36
QF E + P + S T V++ S C Q SR I+ + P+ A +LPPL+
Sbjct: 836 QFVEDQFPFSISDTHSVSNSSPEEASPSC--HQPPSRIPIQSSSPPLVQAPSSLPPLSSD 893
Query: 35 NTR 27
+ R
Sbjct: 894 SHR 896
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 827,997,218
Number of Sequences: 1657284
Number of extensions: 15349778
Number of successful extensions: 35419
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 34296
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35413
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 83621356644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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