Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0408.Seq
         (702 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    28   0.064
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    28   0.064
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    23   3.2  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    23   3.2  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   7.4  

>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 28.3 bits (60), Expect = 0.064
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +1

Query: 469 FINCSASGKVHVWLLDSSKK 528
           FINC+A G+V VW+ ++  K
Sbjct: 226 FINCTAKGRVAVWMCNNLHK 245


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 28.3 bits (60), Expect = 0.064
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +1

Query: 469 FINCSASGKVHVWLLDSSKK 528
           FINC+A G+V VW+ ++  K
Sbjct: 226 FINCTAKGRVAVWMCNNLHK 245


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = -2

Query: 476 LINSRSRKSGFNYYYTLAQTQASGLEVDEVPIELDLI-KGTIYGFVVN 336
           L+  RSRKS  NY+ T      + L V  + +  D+I K T+  +  N
Sbjct: 49  LLFGRSRKSRMNYFIT--HLALADLSVGLINVLTDIIWKTTVAWYAGN 94


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = +2

Query: 470 LLTVQHLGKCTCGCWILPKSSHLLHXVLLIMXT*LNC 580
           LL ++ +  C CG  +  +SS +L  +  +  +  NC
Sbjct: 203 LLIMRLISVCLCGASVHSESSKVLPLLFSVSSSSYNC 239


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -1

Query: 516 IQQPHVHFPRC 484
           I +P  HFPRC
Sbjct: 692 IYRPFSHFPRC 702


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,744
Number of Sequences: 336
Number of extensions: 2428
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)