Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0408.Seq
         (702 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    24   4.0  
AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    24   5.3  
AF071161-1|AAC79997.1|  218|Anopheles gambiae glutathione S-tran...    23   9.3  

>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -2

Query: 251 ENAESQLTIAGESLI*CRENNYKMILDNKAM 159
           +N  +QLT A E L  CRE N  +  +N+ +
Sbjct: 111 QNIGAQLTTALEELRLCREENAALRRENELL 141


>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -2

Query: 329 FVISLGIGYQRLSFKLIRQTPSD 261
           F   LG G+Q  SFKLI  +  D
Sbjct: 825 FYEGLGYGFQPFSFKLIIDSDDD 847


>AF071161-1|AAC79997.1|  218|Anopheles gambiae glutathione
           S-transferase D7 protein.
          Length = 218

 Score = 23.0 bits (47), Expect = 9.3
 Identities = 11/18 (61%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
 Frame = -2

Query: 362 GTIYGFVVNYYF-VISLG 312
           GT+Y  VV+YYF  I LG
Sbjct: 104 GTLYQRVVDYYFPTIQLG 121


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 564,845
Number of Sequences: 2352
Number of extensions: 9844
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71504505
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)