Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0407.Seq
         (934 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    23   2.6  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    22   5.9  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    22   7.9  

>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -3

Query: 248 IHYTILTILNHKWNTL 201
           +  T++T+  HKW+TL
Sbjct: 83  VFVTMMTLKRHKWSTL 98


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 7/25 (28%), Positives = 15/25 (60%)
 Frame = -3

Query: 740 VYKLXXTFTAIESVKNSPLRTTVMW 666
           V++L      +E +KN+ ++ T +W
Sbjct: 117 VFRLKQLNAKVEMLKNARVKNTALW 141


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 7/23 (30%), Positives = 15/23 (65%)
 Frame = +3

Query: 429 FRDLHTLYVTSRSMTYLMLSPHY 497
           F  +HTL +    + +L+++P+Y
Sbjct: 266 FYGVHTLLILFSCLLHLVVTPYY 288


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,719
Number of Sequences: 336
Number of extensions: 4058
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 26168549
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)