Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0406.Seq
         (525 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2ZRF5 Cluster: Putative uncharacterized protein; n=1; ...    33   4.0  
UniRef50_Q7Q7N7 Cluster: ENSANGP00000020895; n=1; Anopheles gamb...    32   9.3  

>UniRef50_A2ZRF5 Cluster: Putative uncharacterized protein; n=1;
           Oryza sativa (japonica cultivar-group)|Rep: Putative
           uncharacterized protein - Oryza sativa subsp. japonica
           (Rice)
          Length = 90

 Score = 33.1 bits (72), Expect = 4.0
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = -3

Query: 106 IYRYLIVALLVKGWSGPIQALVTLLWPEHVLYIG 5
           +Y Y    LLV  WSG IQ L   +W +H++ IG
Sbjct: 34  LYNYWKSLLLVLVWSGMIQDLQAGMWIDHIVMIG 67


>UniRef50_Q7Q7N7 Cluster: ENSANGP00000020895; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000020895 - Anopheles gambiae
           str. PEST
          Length = 740

 Score = 31.9 bits (69), Expect = 9.3
 Identities = 13/26 (50%), Positives = 19/26 (73%)
 Frame = +2

Query: 50  LYGTRPSFHQQGYDQIPIDSMQGLEI 127
           LYG  PS +  GY+ IP DS++G+E+
Sbjct: 501 LYGGSPSKNDPGYETIPGDSIKGMEM 526


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 429,974,452
Number of Sequences: 1657284
Number of extensions: 7281729
Number of successful extensions: 18052
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 17537
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18043
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 33037407449
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)