Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0402.Seq
(851 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal prot... 198 6e-51
U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal prot... 198 6e-51
AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p pro... 198 6e-51
AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA... 198 6e-51
X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml prot... 197 1e-50
BT029103-1|ABJ17036.1| 823|Drosophila melanogaster IP14290p pro... 30 3.5
AE014297-4030|AAF56644.2| 1958|Drosophila melanogaster CG5521-PA... 30 3.5
AE014134-733|AAO41157.1| 579|Drosophila melanogaster CG33003-PA... 30 4.6
>U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal protein
S2 protein.
Length = 267
Score = 198 bits (484), Expect = 6e-51
Identities = 116/193 (60%), Positives = 127/193 (65%), Gaps = 3/193 (1%)
Frame = +3
Query: 210 KNRQTREHLLVFFTNKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 389
K + E L KEFEIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDN
Sbjct: 57 KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 116
Query: 390 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK-*ESHT-PSLARSPASVVP* 563
NGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNK + HT P V
Sbjct: 117 NGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVSV 176
Query: 564 QSG*FXXXXXXXXXXRQFPKKLLQMAGVQDCYTSASWFNWHLWKFC*SHITLAIAKTYAY 743
+ PKKLL MAG++DCYTSA L F AIAKTYAY
Sbjct: 177 RL--IPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGTLGNFA-KATYAAIAKTYAY 233
Query: 744 LXLTV-EDIPLAN 779
L + +++PL +
Sbjct: 234 LTPDLWKEMPLGS 246
Score = 81.0 bits (191), Expect = 2e-15
Identities = 36/39 (92%), Positives = 38/39 (97%)
Frame = +2
Query: 500 G*QIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPV 616
G +IGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPV
Sbjct: 154 GNKIGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPV 192
Score = 68.5 bits (160), Expect = 1e-11
Identities = 31/36 (86%), Positives = 32/36 (88%)
Frame = +1
Query: 151 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIK 258
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIK
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIK 72
>U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal protein
S2 protein.
Length = 267
Score = 198 bits (484), Expect = 6e-51
Identities = 116/193 (60%), Positives = 127/193 (65%), Gaps = 3/193 (1%)
Frame = +3
Query: 210 KNRQTREHLLVFFTNKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 389
K + E L KEFEIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDN
Sbjct: 57 KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 116
Query: 390 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK-*ESHT-PSLARSPASVVP* 563
NGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNK + HT P V
Sbjct: 117 NGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVSV 176
Query: 564 QSG*FXXXXXXXXXXRQFPKKLLQMAGVQDCYTSASWFNWHLWKFC*SHITLAIAKTYAY 743
+ PKKLL MAG++DCYTSA L F AIAKTYAY
Sbjct: 177 RL--IPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGTLGNFA-KATYAAIAKTYAY 233
Query: 744 LXLTV-EDIPLAN 779
L + +++PL +
Sbjct: 234 LTPDLWKEMPLGS 246
Score = 81.0 bits (191), Expect = 2e-15
Identities = 36/39 (92%), Positives = 38/39 (97%)
Frame = +2
Query: 500 G*QIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPV 616
G +IGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPV
Sbjct: 154 GNKIGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPV 192
Score = 68.5 bits (160), Expect = 1e-11
Identities = 31/36 (86%), Positives = 32/36 (88%)
Frame = +1
Query: 151 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIK 258
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIK
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIK 72
>AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p
protein.
Length = 267
Score = 198 bits (484), Expect = 6e-51
Identities = 116/193 (60%), Positives = 127/193 (65%), Gaps = 3/193 (1%)
Frame = +3
Query: 210 KNRQTREHLLVFFTNKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 389
K + E L KEFEIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDN
Sbjct: 57 KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 116
Query: 390 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK-*ESHT-PSLARSPASVVP* 563
NGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNK + HT P V
Sbjct: 117 NGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVSV 176
Query: 564 QSG*FXXXXXXXXXXRQFPKKLLQMAGVQDCYTSASWFNWHLWKFC*SHITLAIAKTYAY 743
+ PKKLL MAG++DCYTSA L F AIAKTYAY
Sbjct: 177 RL--IPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGTLGNFA-KATYAAIAKTYAY 233
Query: 744 LXLTV-EDIPLAN 779
L + +++PL +
Sbjct: 234 LTPDLWKEMPLGS 246
Score = 81.0 bits (191), Expect = 2e-15
Identities = 36/39 (92%), Positives = 38/39 (97%)
Frame = +2
Query: 500 G*QIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPV 616
G +IGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPV
Sbjct: 154 GNKIGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPV 192
Score = 68.5 bits (160), Expect = 1e-11
Identities = 31/36 (86%), Positives = 32/36 (88%)
Frame = +1
Query: 151 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIK 258
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIK
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIK 72
>AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA
protein.
Length = 267
Score = 198 bits (484), Expect = 6e-51
Identities = 116/193 (60%), Positives = 127/193 (65%), Gaps = 3/193 (1%)
Frame = +3
Query: 210 KNRQTREHLLVFFTNKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 389
K + E L KEFEIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDN
Sbjct: 57 KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 116
Query: 390 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK-*ESHT-PSLARSPASVVP* 563
NGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNK + HT P V
Sbjct: 117 NGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVSV 176
Query: 564 QSG*FXXXXXXXXXXRQFPKKLLQMAGVQDCYTSASWFNWHLWKFC*SHITLAIAKTYAY 743
+ PKKLL MAG++DCYTSA L F AIAKTYAY
Sbjct: 177 RL--IPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGTLGNFA-KATYAAIAKTYAY 233
Query: 744 LXLTV-EDIPLAN 779
L + +++PL +
Sbjct: 234 LTPDLWKEMPLGS 246
Score = 81.0 bits (191), Expect = 2e-15
Identities = 36/39 (92%), Positives = 38/39 (97%)
Frame = +2
Query: 500 G*QIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPV 616
G +IGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPV
Sbjct: 154 GNKIGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPV 192
Score = 68.5 bits (160), Expect = 1e-11
Identities = 31/36 (86%), Positives = 32/36 (88%)
Frame = +1
Query: 151 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIK 258
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIK
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIK 72
>X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml protein
S2 protein.
Length = 267
Score = 197 bits (481), Expect = 1e-50
Identities = 115/193 (59%), Positives = 127/193 (65%), Gaps = 3/193 (1%)
Frame = +3
Query: 210 KNRQTREHLLVFFTNKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 389
K + E L KEFEIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDN
Sbjct: 57 KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 116
Query: 390 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK-*ESHT-PSLARSPASVVP* 563
NGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNK + HT P V
Sbjct: 117 NGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVSV 176
Query: 564 QSG*FXXXXXXXXXXRQFPKKLLQMAGVQDCYTSASWFNWHLWKFC*SHITLAIAKTYAY 743
+ P+KLL MAG++DCYTSA L F AIAKTYAY
Sbjct: 177 RL--IPAPRGTGIVSAPVPRKLLTMAGIEDCYTSARGSTGTLGNFA-KATYAAIAKTYAY 233
Query: 744 LXLTV-EDIPLAN 779
L + +++PL +
Sbjct: 234 LTPDLWKEMPLGS 246
Score = 81.0 bits (191), Expect = 2e-15
Identities = 36/39 (92%), Positives = 38/39 (97%)
Frame = +2
Query: 500 G*QIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPV 616
G +IGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPV
Sbjct: 154 GNKIGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPV 192
Score = 68.5 bits (160), Expect = 1e-11
Identities = 31/36 (86%), Positives = 32/36 (88%)
Frame = +1
Query: 151 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIK 258
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIK
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIK 72
>BT029103-1|ABJ17036.1| 823|Drosophila melanogaster IP14290p
protein.
Length = 823
Score = 30.3 bits (65), Expect = 3.5
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = -2
Query: 157 LPCRAHDHGRDHDRVHEDRHGLYLHRVIRIRREN-RHVHRLEQRPPLLN 14
L C H D R+H + GL + V+ + REN VH + ++ LLN
Sbjct: 359 LDCTLHIEDVDQVRLHGYQQGLIVRDVLYVNRENINFVHEVYRQAFLLN 407
>AE014297-4030|AAF56644.2| 1958|Drosophila melanogaster CG5521-PA
protein.
Length = 1958
Score = 30.3 bits (65), Expect = 3.5
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = -2
Query: 157 LPCRAHDHGRDHDRVHEDRHGLYLHRVIRIRREN-RHVHRLEQRPPLLN 14
L C H D R+H + GL + V+ + REN VH + ++ LLN
Sbjct: 325 LDCTLHIEDVDQVRLHGYQQGLIVRDVLYVNRENINFVHEVYRQAFLLN 373
>AE014134-733|AAO41157.1| 579|Drosophila melanogaster CG33003-PA
protein.
Length = 579
Score = 29.9 bits (64), Expect = 4.6
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -2
Query: 142 HDHGRDHDRVHEDRHGLY 89
HDH DHD VH+ H Y
Sbjct: 413 HDHAPDHDHVHDHHHDHY 430
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,938,870
Number of Sequences: 53049
Number of extensions: 831854
Number of successful extensions: 4644
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2421
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3580
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4085918148
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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