Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0398.Seq
         (843 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    25   3.8  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    24   5.0  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    24   6.7  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    24   6.7  

>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 24.6 bits (51), Expect = 3.8
 Identities = 16/28 (57%), Positives = 16/28 (57%), Gaps = 6/28 (21%)
 Frame = -2

Query: 407 GDAIGGSD------QGRGEVGSPHGGGG 342
           G A GGSD       GRG VGS  GGGG
Sbjct: 536 GMAGGGSDGPEYEGAGRGGVGSGIGGGG 563



 Score = 24.6 bits (51), Expect = 3.8
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = -2

Query: 407 GDAIGGSDQGRGEVGSPHGGGGTL 336
           G A+GG     G  GS  G GG L
Sbjct: 673 GGAVGGGSGAGGGAGSSGGSGGGL 696



 Score = 23.8 bits (49), Expect = 6.7
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = -2

Query: 395 GGSDQGRGEVGSPHGGGG 342
           GGS  G    GSP+GGGG
Sbjct: 690 GGSGGGLAS-GSPYGGGG 706


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 24.2 bits (50), Expect = 5.0
 Identities = 14/24 (58%), Positives = 14/24 (58%)
 Frame = -2

Query: 413 RCGDAIGGSDQGRGEVGSPHGGGG 342
           R GD  GG     GEVGS  GGGG
Sbjct: 721 RGGD--GGCGSIGGEVGSVGGGGG 742


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 23.8 bits (49), Expect = 6.7
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -2

Query: 404  DAIGGSDQGRGEVGSPHGGG 345
            D  G    G G+ GS HGGG
Sbjct: 2038 DDSGDGATGSGDNGSQHGGG 2057


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
           TPR-containing phosphoprotein protein.
          Length = 1200

 Score = 23.8 bits (49), Expect = 6.7
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = -2

Query: 404 DAIGGSDQGRGEVGSPHGGGG 342
           D I  SD   GEVG   G GG
Sbjct: 907 DYISDSDASGGEVGGGGGSGG 927


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 588,129
Number of Sequences: 2352
Number of extensions: 8458
Number of successful extensions: 25
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 89305416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)