Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0397.Seq
         (784 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY735443-1|AAU08018.1|  163|Anopheles gambiae bursicon protein.        25   3.5  
AY735442-1|AAU08017.1|  163|Anopheles gambiae bursicon protein.        25   3.5  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    25   3.5  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    24   6.1  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    24   6.1  

>AY735443-1|AAU08018.1|  163|Anopheles gambiae bursicon protein.
          Length = 163

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -3

Query: 716 VVTVAHGLQQCPGAEPKPLPTAKGLGQ 636
           V  V H LQ  PG  PKP+P+   +G+
Sbjct: 41  VTPVIHVLQY-PGCVPKPIPSFACIGR 66


>AY735442-1|AAU08017.1|  163|Anopheles gambiae bursicon protein.
          Length = 163

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -3

Query: 716 VVTVAHGLQQCPGAEPKPLPTAKGLGQ 636
           V  V H LQ  PG  PKP+P+   +G+
Sbjct: 41  VTPVIHVLQY-PGCVPKPIPSFACIGR 66


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 13/50 (26%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
 Frame = -2

Query: 519 SPEESDNGLPKHNIFQAGHHQQSTSGL-QKHNYNAYNKSRNYNLNDNRPI 373
           SP  S  G+P   +  + H Q +T+GL   H Y   + +     + + P+
Sbjct: 327 SPPGSLGGVPGSIVSSSAHQQHTTAGLNSSHIYTTPSSNSLSTQHSHSPV 376


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
 Frame = -2

Query: 462 HQQSTSGLQKHNYNAYNKSRNYNLNDNRPIAKTMHASN--FNCPLCNNQH 319
           +Q S + +      A    RN  L    P+ +T +       CPLCN QH
Sbjct: 306 NQYSANSIMVTGRQARRDGRNVAL----PVQQTNNTFKGYLKCPLCNEQH 351


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 730 PPDGEWLPSPMDFSNAQG 677
           PPD  W P  + F+NA G
Sbjct: 104 PPDKVWKPDIVLFNNADG 121


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 741,374
Number of Sequences: 2352
Number of extensions: 13884
Number of successful extensions: 63
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 63
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81913191
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)