Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0397.Seq
         (784 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ012576-1|CAA10062.1|  601|Drosophila melanogaster zinc finger ...    36   0.082
AF181647-1|AAD55433.1|  601|Drosophila melanogaster ken protein.       36   0.082
AE013599-3711|AAF47084.1|  601|Drosophila melanogaster CG5575-PA...    36   0.082
AB010261-4|BAA32687.1|  601|Drosophila melanogaster ken protein.       36   0.082
AB010260-1|BAA32683.1|  601|Drosophila melanogaster ken protein.       36   0.082
U77370-1|AAB39842.2|  717|Drosophila melanogaster transcription ...    31   1.8  
AY058627-1|AAL13856.1|  717|Drosophila melanogaster LD32539p pro...    31   1.8  
AL121800-1|CAD24780.1|  717|Drosophila melanogaster EG:BACN5I9.1...    31   1.8  
AE014298-519|AAF45866.2|  717|Drosophila melanogaster CG10798-PA...    31   1.8  
Y15606-1|CAA75690.1|  552|Drosophila melanogaster hormone recept...    30   4.1  
X89246-1|CAA61534.1|  551|Drosophila melanogaster DHR38 protein.       30   4.1  
U36762-1|AAC46926.1|  546|Drosophila melanogaster DHR38 protein.       30   4.1  
AJ002073-1|CAA05172.1| 1073|Drosophila melanogaster hormone rece...    30   4.1  
AE014134-3271|AAN11085.1|  556|Drosophila melanogaster CG1864-PC...    30   4.1  
AE014134-3270|AAF53914.1| 1078|Drosophila melanogaster CG1864-PB...    30   4.1  
AE014134-2514|AAF53406.2| 1025|Drosophila melanogaster CG12636-P...    29   7.2  

>AJ012576-1|CAA10062.1|  601|Drosophila melanogaster zinc finger
           protein protein.
          Length = 601

 Score = 35.5 bits (78), Expect = 0.082
 Identities = 20/69 (28%), Positives = 35/69 (50%)
 Frame = -2

Query: 540 EVYNPRNSPEESDNGLPKHNIFQAGHHQQSTSGLQKHNYNAYNKSRNYNLNDNRPIAKTM 361
           E+ N  N+P    +G    NI  + +HQQ     Q H+++ +N + N N N+N   + T+
Sbjct: 220 EIVNLSNAPPSGTSG-SNSNISTSSNHQQQ----QHHHHHHHNHNNNNNNNNNNSSSSTI 274

Query: 360 HASNFNCPL 334
           +  N +  L
Sbjct: 275 NPVNLSLDL 283


>AF181647-1|AAD55433.1|  601|Drosophila melanogaster ken protein.
          Length = 601

 Score = 35.5 bits (78), Expect = 0.082
 Identities = 20/69 (28%), Positives = 35/69 (50%)
 Frame = -2

Query: 540 EVYNPRNSPEESDNGLPKHNIFQAGHHQQSTSGLQKHNYNAYNKSRNYNLNDNRPIAKTM 361
           E+ N  N+P    +G    NI  + +HQQ     Q H+++ +N + N N N+N   + T+
Sbjct: 220 EIVNLSNAPPSGTSG-SNSNISTSSNHQQQ----QHHHHHHHNHNNNNNNNNNNSSSSTI 274

Query: 360 HASNFNCPL 334
           +  N +  L
Sbjct: 275 NPVNLSLDL 283


>AE013599-3711|AAF47084.1|  601|Drosophila melanogaster CG5575-PA
           protein.
          Length = 601

 Score = 35.5 bits (78), Expect = 0.082
 Identities = 20/69 (28%), Positives = 35/69 (50%)
 Frame = -2

Query: 540 EVYNPRNSPEESDNGLPKHNIFQAGHHQQSTSGLQKHNYNAYNKSRNYNLNDNRPIAKTM 361
           E+ N  N+P    +G    NI  + +HQQ     Q H+++ +N + N N N+N   + T+
Sbjct: 220 EIVNLSNAPPSGTSG-SNSNISTSSNHQQQ----QHHHHHHHNHNNNNNNNNNNSSSSTI 274

Query: 360 HASNFNCPL 334
           +  N +  L
Sbjct: 275 NPVNLSLDL 283


>AB010261-4|BAA32687.1|  601|Drosophila melanogaster ken protein.
          Length = 601

 Score = 35.5 bits (78), Expect = 0.082
 Identities = 20/69 (28%), Positives = 35/69 (50%)
 Frame = -2

Query: 540 EVYNPRNSPEESDNGLPKHNIFQAGHHQQSTSGLQKHNYNAYNKSRNYNLNDNRPIAKTM 361
           E+ N  N+P    +G    NI  + +HQQ     Q H+++ +N + N N N+N   + T+
Sbjct: 220 EIVNLSNAPPSGTSG-SNSNISTSSNHQQQ----QHHHHHHHNHNNNNNNNNNNSSSSTI 274

Query: 360 HASNFNCPL 334
           +  N +  L
Sbjct: 275 NPVNLSLDL 283


>AB010260-1|BAA32683.1|  601|Drosophila melanogaster ken protein.
          Length = 601

 Score = 35.5 bits (78), Expect = 0.082
 Identities = 20/69 (28%), Positives = 35/69 (50%)
 Frame = -2

Query: 540 EVYNPRNSPEESDNGLPKHNIFQAGHHQQSTSGLQKHNYNAYNKSRNYNLNDNRPIAKTM 361
           E+ N  N+P    +G    NI  + +HQQ     Q H+++ +N + N N N+N   + T+
Sbjct: 220 EIVNLSNAPPSGTSG-SNSNISTSSNHQQQ----QHHHHHHHNHNNNNNNNNNNSSSSTI 274

Query: 360 HASNFNCPL 334
           +  N +  L
Sbjct: 275 NPVNLSLDL 283


>U77370-1|AAB39842.2|  717|Drosophila melanogaster transcription
           factor dMyc/dm protein.
          Length = 717

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
 Frame = -2

Query: 519 SPEESDNGLPKHNIFQAGHHQQSTSG----LQKHNYNAYNKSRNYNLNDNRPIAKTMHAS 352
           S  +SD+G P +  F   HH+ S SG    +  +N N+ NK+     N N  +   MH +
Sbjct: 330 SDSDSDDGEPLN--FDLRHHRTSKSGSNASITTNNNNSNNKNNKLKNNSN-GMLHMMHIT 386

Query: 351 NFNCPLCNN 325
           + +   CN+
Sbjct: 387 DHSYTRCND 395


>AY058627-1|AAL13856.1|  717|Drosophila melanogaster LD32539p
           protein.
          Length = 717

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
 Frame = -2

Query: 519 SPEESDNGLPKHNIFQAGHHQQSTSG----LQKHNYNAYNKSRNYNLNDNRPIAKTMHAS 352
           S  +SD+G P +  F   HH+ S SG    +  +N N+ NK+     N N  +   MH +
Sbjct: 330 SDSDSDDGEPLN--FDLRHHRTSKSGSNASITTNNNNSNNKNNKLKNNSN-GMLHMMHIT 386

Query: 351 NFNCPLCNN 325
           + +   CN+
Sbjct: 387 DHSYTRCND 395


>AL121800-1|CAD24780.1|  717|Drosophila melanogaster
           EG:BACN5I9.1,FBgn0000472;dm protein.
          Length = 717

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
 Frame = -2

Query: 519 SPEESDNGLPKHNIFQAGHHQQSTSG----LQKHNYNAYNKSRNYNLNDNRPIAKTMHAS 352
           S  +SD+G P +  F   HH+ S SG    +  +N N+ NK+     N N  +   MH +
Sbjct: 330 SDSDSDDGEPLN--FDLRHHRTSKSGSNASITTNNNNSNNKNNKLKNNSN-GMLHMMHIT 386

Query: 351 NFNCPLCNN 325
           + +   CN+
Sbjct: 387 DHSYTRCND 395


>AE014298-519|AAF45866.2|  717|Drosophila melanogaster CG10798-PA
           protein.
          Length = 717

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
 Frame = -2

Query: 519 SPEESDNGLPKHNIFQAGHHQQSTSG----LQKHNYNAYNKSRNYNLNDNRPIAKTMHAS 352
           S  +SD+G P +  F   HH+ S SG    +  +N N+ NK+     N N  +   MH +
Sbjct: 330 SDSDSDDGEPLN--FDLRHHRTSKSGSNASITTNNNNSNNKNNKLKNNSN-GMLHMMHIT 386

Query: 351 NFNCPLCNN 325
           + +   CN+
Sbjct: 387 DHSYTRCND 395


>Y15606-1|CAA75690.1|  552|Drosophila melanogaster hormone receptor
           38 protein.
          Length = 552

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -2

Query: 501 NGLPKHNIFQAGHHQQSTSGLQKHNYNAYNKSRNYNL 391
           NG+   + F     QQ     Q+HNYN++N  R Y+L
Sbjct: 86  NGVSAADNFYGQQQQQQQQSYQQHNYNSHNGER-YSL 121


>X89246-1|CAA61534.1|  551|Drosophila melanogaster DHR38 protein.
          Length = 551

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -2

Query: 501 NGLPKHNIFQAGHHQQSTSGLQKHNYNAYNKSRNYNL 391
           NG+   + F     QQ     Q+HNYN++N  R Y+L
Sbjct: 86  NGVSAADNFYGQQQQQQQQSYQQHNYNSHNGER-YSL 121


>U36762-1|AAC46926.1|  546|Drosophila melanogaster DHR38 protein.
          Length = 546

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -2

Query: 501 NGLPKHNIFQAGHHQQSTSGLQKHNYNAYNKSRNYNL 391
           NG+   + F     QQ     Q+HNYN++N  R Y+L
Sbjct: 81  NGVSAADNFYGQQQQQQQQSYQQHNYNSHNGER-YSL 116


>AJ002073-1|CAA05172.1| 1073|Drosophila melanogaster hormone
           receptor 38 protein.
          Length = 1073

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -2

Query: 501 NGLPKHNIFQAGHHQQSTSGLQKHNYNAYNKSRNYNL 391
           NG+   + F     QQ     Q+HNYN++N  R Y+L
Sbjct: 608 NGVSAADNFYGQQQQQQQQSYQQHNYNSHNGER-YSL 643


>AE014134-3271|AAN11085.1|  556|Drosophila melanogaster CG1864-PC,
           isoform C protein.
          Length = 556

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -2

Query: 501 NGLPKHNIFQAGHHQQSTSGLQKHNYNAYNKSRNYNL 391
           NG+   + F     QQ     Q+HNYN++N  R Y+L
Sbjct: 86  NGVSAADNFYGQQQQQQQQSYQQHNYNSHNGER-YSL 121


>AE014134-3270|AAF53914.1| 1078|Drosophila melanogaster CG1864-PB,
           isoform B protein.
          Length = 1078

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -2

Query: 501 NGLPKHNIFQAGHHQQSTSGLQKHNYNAYNKSRNYNL 391
           NG+   + F     QQ     Q+HNYN++N  R Y+L
Sbjct: 608 NGVSAADNFYGQQQQQQQQSYQQHNYNSHNGER-YSL 643


>AE014134-2514|AAF53406.2| 1025|Drosophila melanogaster CG12636-PA
           protein.
          Length = 1025

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 7/67 (10%)
 Frame = -3

Query: 200 ILLEFYS---FLNMEWTLKE---ERVAVIALHRCGYAPIQIFNILKNLNNTKRFVYRT-I 42
           ILL+  S   F N+ W   +    + +V+ +H   Y+P+Q F   K    T   VY+T I
Sbjct: 448 ILLQIISQQNFHNIYWWYPDPFPSKTSVLIVH--AYSPVQFFRSAKEFQLTNPLVYKTNI 505

Query: 41  KRYNEDS 21
             +N+ S
Sbjct: 506 THFNDAS 512


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,067,957
Number of Sequences: 53049
Number of extensions: 615302
Number of successful extensions: 2029
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1923
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2019
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3613676352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)