Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0396.Seq
         (700 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    25   2.3  
AY745218-1|AAU93485.1|  159|Anopheles gambiae cytochrome P450 pr...    25   3.0  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   7.0  
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    23   9.2  

>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -2

Query: 573 KYILYISIIVVHIFTSLQNHYFPLLSLF 490
           K+ LY+ I+ V  + S   +YF  LS F
Sbjct: 109 KFRLYVGIVYVPPYLSSDRNYFESLSAF 136


>AY745218-1|AAU93485.1|  159|Anopheles gambiae cytochrome P450
           protein.
          Length = 159

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = -2

Query: 480 RRFVANKDXGTSRVPGPIDHVAAMFD 403
           RR  A  D G  R+P  ID V  +FD
Sbjct: 74  RRTTAEVDLGQYRLPADIDIVIDIFD 99


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = +2

Query: 317  NLSYIPTTVLSRIDI-FSNHSKIKLPF 394
            ++S+IP+T   RIDI     S + +PF
Sbjct: 1462 DISFIPSTTHGRIDIDHIRFSPLSMPF 1488


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 9/35 (25%), Positives = 16/35 (45%)
 Frame = -2

Query: 501  LSLFANLRRFVANKDXGTSRVPGPIDHVAAMFDDI 397
            +    N R+F  +K+ G   +  P+D    M  D+
Sbjct: 1321 MDTMGNFRKFSLDKETGELSLAAPLDREQQMMYDL 1355


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 767,111
Number of Sequences: 2352
Number of extensions: 14873
Number of successful extensions: 22
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)