Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0396.Seq
         (700 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061085-1|AAL28633.1|  491|Drosophila melanogaster LD07362p pro...    62   9e-10
AE014297-1514|AAF54806.2|  491|Drosophila melanogaster CG5663-PA...    62   9e-10
AY094682-1|AAM11035.1|  279|Drosophila melanogaster GH07367p pro...    29   8.0  
AE014297-2818|AAF55780.1|  279|Drosophila melanogaster CG5412-PA...    29   8.0  

>AY061085-1|AAL28633.1|  491|Drosophila melanogaster LD07362p
           protein.
          Length = 491

 Score = 61.7 bits (143), Expect = 9e-10
 Identities = 24/39 (61%), Positives = 34/39 (87%)
 Frame = +1

Query: 511 IVVLQGGEDVNHYDTDVQYVFRQEAYFTWVCGVREPGCY 627
           +V+L+GG+D + Y+TDV YVFRQE+YF ++ GV+EPGCY
Sbjct: 44  LVLLEGGKDQSLYNTDVDYVFRQESYFQYLFGVKEPGCY 82


>AE014297-1514|AAF54806.2|  491|Drosophila melanogaster CG5663-PA
           protein.
          Length = 491

 Score = 61.7 bits (143), Expect = 9e-10
 Identities = 24/39 (61%), Positives = 34/39 (87%)
 Frame = +1

Query: 511 IVVLQGGEDVNHYDTDVQYVFRQEAYFTWVCGVREPGCY 627
           +V+L+GG+D + Y+TDV YVFRQE+YF ++ GV+EPGCY
Sbjct: 44  LVLLEGGKDQSLYNTDVDYVFRQESYFQYLFGVKEPGCY 82


>AY094682-1|AAM11035.1|  279|Drosophila melanogaster GH07367p
           protein.
          Length = 279

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = +1

Query: 559 VQYVFRQEAYFTWVCGVREPGCYFGPRCXVQGKVLTSLXPE 681
           V+  +R +  F  + G  +  C+ G  C +  K LTS+ PE
Sbjct: 116 VEEAWRTQGPFQGLLGFSQGACFVGLICGLAKKKLTSIRPE 156


>AE014297-2818|AAF55780.1|  279|Drosophila melanogaster CG5412-PA
           protein.
          Length = 279

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = +1

Query: 559 VQYVFRQEAYFTWVCGVREPGCYFGPRCXVQGKVLTSLXPE 681
           V+  +R +  F  + G  +  C+ G  C +  K LTS+ PE
Sbjct: 116 VEEAWRTQGPFQGLLGFSQGACFVGLICGLAKKKLTSIRPE 156


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,256,254
Number of Sequences: 53049
Number of extensions: 719900
Number of successful extensions: 1063
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1047
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1063
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)