Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0393.Seq
         (906 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    32   0.005
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    24   1.9  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    24   1.9  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    22   5.7  

>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 32.3 bits (70), Expect = 0.005
 Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
 Frame = -2

Query: 515 NYLHNNYC--CITQLHNFFTKKISFVYTMKRNVGNVK*HLCLQSFGLLTVN 369
           NY++++ C    T + +FF K+  +++T      N+   LCL +FGLL VN
Sbjct: 165 NYVYSSKCENNSTGVEHFFKKQFHYIFTYMPY--NIVFGLCLTTFGLLPVN 213


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 13/46 (28%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = -3

Query: 619 YFTFRLLKR*FIKXYVTFLLNYN-YIFTYSHIKFGVIICTIIIAVL 485
           YF   +     +   VT  + +N Y++ ++HI F   IC   IA++
Sbjct: 43  YFIIAIYVLTILTSSVTLHVCFNSYMYAFTHIFFFFAICCDFIALI 88


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 10/41 (24%), Positives = 21/41 (51%)
 Frame = -3

Query: 589 FIKXYVTFLLNYNYIFTYSHIKFGVIICTIIIAVLRNYTTF 467
           F++  +  L+N+N+  +Y  +      CT + A++    TF
Sbjct: 17  FVQSEIFCLVNFNHRESYFRLSKAKSFCTFVAALVYCSVTF 57


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
 Frame = -3

Query: 586 IKXYVTFLLNYNYIFTYSHIKFGVIICTIIIAVLRNY--TTFLQKK 455
           ++  VT + N N  FTY +I     +  +I   LR Y    FL +K
Sbjct: 324 LRHEVTEIYNENGEFTYENILGMKYLDMVISETLRKYPLAPFLNRK 369


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,262
Number of Sequences: 336
Number of extensions: 3410
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25237652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)