Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0392.Seq
         (781 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY645023-1|AAT92559.1|   99|Anopheles gambiae wingless protein.        24   4.6  
DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domai...    23   8.0  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    23   8.0  

>AY645023-1|AAT92559.1|   99|Anopheles gambiae wingless protein.
          Length = 99

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -2

Query: 660 GSRQNVLLVPQEGFLQRTPR 601
           GS+  V L P  GF +R PR
Sbjct: 14  GSKDLVYLEPSPGFCERNPR 33


>DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 285

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 8/25 (32%), Positives = 9/25 (36%)
 Frame = +3

Query: 474 TRTASHQAYCQCGCGASXQSDLRHF 548
           T       YC C C      D+ HF
Sbjct: 232 TEVCRRSCYCGCQCRRGYDRDVLHF 256


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = -1

Query: 511 PHWQYA*CDAVRVLPGL 461
           PHW Y  C +   +P L
Sbjct: 51  PHWPYLLCSSCSAMPAL 67


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 839,717
Number of Sequences: 2352
Number of extensions: 16509
Number of successful extensions: 21
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81497388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)