Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0392.Seq
(781 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY130758-5|AAN61521.1| 2693|Caenorhabditis elegans 301KDa_2 prot... 31 1.2
AY130758-4|AAN61520.1| 2708|Caenorhabditis elegans 301KDa_1 prot... 31 1.2
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 31 1.2
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 31 1.2
Z81568-9|CAB04599.2| 386|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical p... 29 3.7
Z54342-1|CAA91143.1| 505|Caenorhabditis elegans Hypothetical pr... 28 6.5
AC006814-2|AAP46269.1| 430|Caenorhabditis elegans Aldehyde dehy... 28 6.5
AC006814-1|AAP46268.1| 499|Caenorhabditis elegans Aldehyde dehy... 28 6.5
U13646-5|ABA00178.1| 353|Caenorhabditis elegans Hypothetical pr... 28 8.6
>AY130758-5|AAN61521.1| 2693|Caenorhabditis elegans 301KDa_2 protein
protein.
Length = 2693
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
Frame = -3
Query: 347 PPFIKYLSGMDTVNIYRLSFVSCLVMAMPCA---WRSNSI 237
P FI+ L G N+ V C V A PCA W NS+
Sbjct: 2280 PNFIEVLPGRSQANLNESLCVECSVSAYPCASIIWTRNSV 2319
>AY130758-4|AAN61520.1| 2708|Caenorhabditis elegans 301KDa_1 protein
protein.
Length = 2708
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
Frame = -3
Query: 347 PPFIKYLSGMDTVNIYRLSFVSCLVMAMPCA---WRSNSI 237
P FI+ L G N+ V C V A PCA W NS+
Sbjct: 2295 PNFIEVLPGRSQANLNESLCVECSVSAYPCASIIWTRNSV 2334
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
Frame = -3
Query: 347 PPFIKYLSGMDTVNIYRLSFVSCLVMAMPCA---WRSNSI 237
P FI+ L G N+ V C V A PCA W NS+
Sbjct: 18106 PNFIEVLPGRSQANLNESLCVECSVSAYPCASIIWTRNSV 18145
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
Frame = -3
Query: 347 PPFIKYLSGMDTVNIYRLSFVSCLVMAMPCA---WRSNSI 237
P FI+ L G N+ V C V A PCA W NS+
Sbjct: 18121 PNFIEVLPGRSQANLNESLCVECSVSAYPCASIIWTRNSV 18160
>Z81568-9|CAB04599.2| 386|Caenorhabditis elegans Hypothetical
protein K08E3.7 protein.
Length = 386
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 563 QSDSTARVVAIRPRGVRCKKPSCGTSNTFW 652
Q +T R++A+ +GV C SCG S FW
Sbjct: 267 QRKATERLIAVDDKGVTCPNVSCGQS-FFW 295
>Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical
protein F47B8.14 protein.
Length = 255
Score = 29.1 bits (62), Expect = 3.7
Identities = 23/80 (28%), Positives = 32/80 (40%)
Frame = +3
Query: 420 GASALSDLRFGISGSPGKTRTASHQAYCQCGCGASXQSDLRHFWRRYAKVIPRPASSPYA 599
G SA +D G P K R + Y + G + ++ PA +P A
Sbjct: 151 GYSAGADAPTGGGSYPSKKRRVARD-YAEEGAAPAAPAEPAPVPAPEPAPEAAPAPAPEA 209
Query: 600 HAVYAAKSLPAAPVIHSGGY 659
V A + PAAP +GGY
Sbjct: 210 APVPAQDAAPAAPAADAGGY 229
>Z54342-1|CAA91143.1| 505|Caenorhabditis elegans Hypothetical
protein C08H9.1 protein.
Length = 505
Score = 28.3 bits (60), Expect = 6.5
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Frame = -2
Query: 165 PGEYFVSVAVNNN----KISNGQKINWQXKGDKTIPCINDSLVDKCRTS 31
P E F + + N K+S I W D+T P D + +KC TS
Sbjct: 195 PNENFKGLIIGNGFMNVKLSTNTMILWSAYHDRTSPDEWDEIKEKCATS 243
>AC006814-2|AAP46269.1| 430|Caenorhabditis elegans Aldehyde
dehydrogenase protein12, isoform b protein.
Length = 430
Score = 28.3 bits (60), Expect = 6.5
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +1
Query: 403 THLSDAARAPYPT-YGSVSLVVLVRREQRRIRHIASADAARATNPTYGISGGV 558
T LSD ARA +G+V L++ E+ I ARA N TYG++ GV
Sbjct: 383 TGLSDEARAVREEIFGAVMLILPFETEEEVI--------ARANNTTYGLAAGV 427
>AC006814-1|AAP46268.1| 499|Caenorhabditis elegans Aldehyde
dehydrogenase protein12, isoform a protein.
Length = 499
Score = 28.3 bits (60), Expect = 6.5
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +1
Query: 403 THLSDAARAPYPT-YGSVSLVVLVRREQRRIRHIASADAARATNPTYGISGGV 558
T LSD ARA +G+V L++ E+ I ARA N TYG++ GV
Sbjct: 383 TGLSDEARAVREEIFGAVMLILPFETEEEVI--------ARANNTTYGLAAGV 427
>U13646-5|ABA00178.1| 353|Caenorhabditis elegans Hypothetical
protein ZK783.6 protein.
Length = 353
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +3
Query: 552 RRYAKVIPRPASSPYAHAVYAAKSLPAAPVIHSGGYLHP 668
R Y V+ AS+P + AA P P++HS Y P
Sbjct: 50 RLYRSVLSSTASAPSSPVRQAAPIAPEKPIVHSDYYGGP 88
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,112,896
Number of Sequences: 27780
Number of extensions: 387063
Number of successful extensions: 857
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 857
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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