Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0389.Seq
         (862 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q21777 Cluster: Putative uncharacterized protein; n=1; ...    37   0.75 
UniRef50_Q7PV49 Cluster: ENSANGP00000008649; n=1; Anopheles gamb...    36   1.3  
UniRef50_A6DQ86 Cluster: Putative uncharacterized protein; n=1; ...    34   4.0  
UniRef50_Q7RDA2 Cluster: Krox-like protein; n=3; Plasmodium (Vin...    34   4.0  
UniRef50_Q179K9 Cluster: Putative uncharacterized protein; n=1; ...    34   4.0  
UniRef50_Q1E3Y2 Cluster: Predicted protein; n=1; Coccidioides im...    34   5.3  
UniRef50_Q9NEX6 Cluster: Putative uncharacterized protein; n=2; ...    33   7.0  
UniRef50_UPI000051AC4E Cluster: PREDICTED: similar to zinc finge...    33   9.3  

>UniRef50_Q21777 Cluster: Putative uncharacterized protein; n=1;
           Caenorhabditis elegans|Rep: Putative uncharacterized
           protein - Caenorhabditis elegans
          Length = 729

 Score = 36.7 bits (81), Expect = 0.75
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = +3

Query: 120 SCVLCTKKYDQYDDYVIHINECTMNV-KLQHFVCPICHEMY 239
           +CVLC KKY  Y   + H  +C     ++Q F C +C+  Y
Sbjct: 306 ACVLCGKKYQHYHWLLKHRTKCLETTDEIQEFKCNVCYRRY 346


>UniRef50_Q7PV49 Cluster: ENSANGP00000008649; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000008649 - Anopheles gambiae
           str. PEST
          Length = 508

 Score = 35.9 bits (79), Expect = 1.3
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = +3

Query: 123 CVLCTKKYDQYDDYVIHINECTMNVKLQHFVCPICHEMYTEK 248
           C LC KK++   +Y +H   C  +V+   F C IC + + EK
Sbjct: 261 CKLCPKKFNHPGNYRVHFIRCHSDVR--KFTCTICGKQFKEK 300



 Score = 35.9 bits (79), Expect = 1.3
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = +3

Query: 123 CVLCTKKYDQYDDYVIHINECTMNVKLQHFVCPICHEMYTEK 248
           C LC KK++   +Y +H   C  +V+   F C IC + + EK
Sbjct: 403 CKLCPKKFNHPGNYRVHFIRCHSDVR--KFTCTICGKQFKEK 442


>UniRef50_A6DQ86 Cluster: Putative uncharacterized protein; n=1;
           Lentisphaera araneosa HTCC2155|Rep: Putative
           uncharacterized protein - Lentisphaera araneosa HTCC2155
          Length = 423

 Score = 34.3 bits (75), Expect = 4.0
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = +3

Query: 117 VSCVLCTKKYDQYDDYVIHINEC 185
           VSCV    KY+QYDDY  H++ C
Sbjct: 120 VSCVDSINKYEQYDDYSFHLSLC 142


>UniRef50_Q7RDA2 Cluster: Krox-like protein; n=3; Plasmodium
           (Vinckeia)|Rep: Krox-like protein - Plasmodium yoelii
           yoelii
          Length = 1077

 Score = 34.3 bits (75), Expect = 4.0
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +3

Query: 123 CVLCTKKYDQYDDYVIHINECTMNVKLQHFVCPICHEMY 239
           C +C K+Y + D   +H+ + T N   + F C  CH +Y
Sbjct: 879 CDVCFKRYKRPDHLKLHLMKHTSNRNEKKFECSTCHSVY 917


>UniRef50_Q179K9 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 253

 Score = 34.3 bits (75), Expect = 4.0
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = +3

Query: 123 CVLCTKKYDQYDDYVIHINECTMNVKLQHFVCPICHEMYTEK 248
           C +C  K+D+Y  Y+ H+ +    +KL    CP C +++ E+
Sbjct: 102 CEVCNLKFDKYHQYIYHMKKYHKEMKL---TCPHCPKVFIEQ 140


>UniRef50_Q1E3Y2 Cluster: Predicted protein; n=1; Coccidioides
           immitis|Rep: Predicted protein - Coccidioides immitis
          Length = 213

 Score = 33.9 bits (74), Expect = 5.3
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = +3

Query: 120 SCVLCTKKYDQYDDYVIHINECTMNVKLQHFVCPICHEMYTEK 248
           SC+ C   +D   +Y  H++E   NV +  + C IC + Y++K
Sbjct: 140 SCIHCASSFDTGSEYRKHVHEAHRNV-VYKWKCGICSKEYSQK 181


>UniRef50_Q9NEX6 Cluster: Putative uncharacterized protein; n=2;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 934

 Score = 33.5 bits (73), Expect = 7.0
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +3

Query: 117 VSCVLCTKKYDQYDDYVIHINECTMNVKLQHFVCPIC 227
           V C++C K+Y  +   + HI+ C ++  LQ + C  C
Sbjct: 218 VKCLVCDKEYTNHMSIIYHIDRCQVDKSLQPWKCWRC 254


>UniRef50_UPI000051AC4E Cluster: PREDICTED: similar to zinc finger
           protein 585A, partial; n=1; Apis mellifera|Rep:
           PREDICTED: similar to zinc finger protein 585A, partial
           - Apis mellifera
          Length = 931

 Score = 33.1 bits (72), Expect = 9.3
 Identities = 14/45 (31%), Positives = 26/45 (57%)
 Frame = +3

Query: 114 NVSCVLCTKKYDQYDDYVIHINECTMNVKLQHFVCPICHEMYTEK 248
           N SC  C K ++  + Y +H+     + KL  F+C IC++ +T++
Sbjct: 411 NFSCEQCKKLFETKEAYELHVKVVHDHDKL--FICTICNKNFTQQ 453


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 756,445,281
Number of Sequences: 1657284
Number of extensions: 14099977
Number of successful extensions: 31902
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 30583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31891
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 76243001646
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)