Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0389.Seq
         (862 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022160-1|AAY51554.1|  520|Drosophila melanogaster IP01388p pro...    32   0.88 
AY118689-1|AAM50549.1|  893|Drosophila melanogaster AT15637p pro...    29   6.2  
AY061195-1|AAL28743.1|  457|Drosophila melanogaster LD15405p pro...    29   6.2  
AE014298-690|AAF45994.2|  543|Drosophila melanogaster CG32772-PA...    29   6.2  
AE014297-4516|AAF56994.1|  457|Drosophila melanogaster CG7928-PA...    29   6.2  
AE013599-3102|AAM68188.1|  889|Drosophila melanogaster CG10543-P...    29   6.2  
AE013599-3101|AAO41340.1| 1024|Drosophila melanogaster CG10543-P...    29   6.2  
AE013599-3100|AAF46652.3| 1634|Drosophila melanogaster CG10543-P...    29   6.2  

>BT022160-1|AAY51554.1|  520|Drosophila melanogaster IP01388p
           protein.
          Length = 520

 Score = 32.3 bits (70), Expect = 0.88
 Identities = 18/81 (22%), Positives = 33/81 (40%)
 Frame = +3

Query: 3   QNDLQRSCSDETLIANDCTQNMXXXXXXXXXXXXXFVNVSCVLCTKKYDQYDDYVIHINE 182
           QN  Q+    + + ++  ++N+                 SC LC K + +    + HI  
Sbjct: 93  QNSQQQQQQQQQMQSSSSSENLQSQDDSEDVDLIFNEEGSCPLCNKTFSRKSSLMTHIRN 152

Query: 183 CTMNVKLQHFVCPICHEMYTE 245
            +   K   FVC  CH+ +T+
Sbjct: 153 HSAERK---FVCTYCHKGFTQ 170


>AY118689-1|AAM50549.1|  893|Drosophila melanogaster AT15637p
           protein.
          Length = 893

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = +3

Query: 123 CVLCTKKYDQYDDYVIHINECTMNVKLQHFVCPICHEMYTEK 248
           C  C ++     + +IH N  TM+VK   FVC  C E Y+ K
Sbjct: 6   CHDCGQRNGNTLEEIIHHNR-TMHVKEFPFVCETCGESYSRK 46


>AY061195-1|AAL28743.1|  457|Drosophila melanogaster LD15405p
           protein.
          Length = 457

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 12/47 (25%), Positives = 21/47 (44%)
 Frame = +3

Query: 108 FVNVSCVLCTKKYDQYDDYVIHINECTMNVKLQHFVCPICHEMYTEK 248
           F    C  C K    Y  ++ H+     +  ++ F CP+C E ++ K
Sbjct: 281 FPGYVCDQCGKTLQSYSGFIGHLQN---HEPVKQFACPVCPERFSRK 324


>AE014298-690|AAF45994.2|  543|Drosophila melanogaster CG32772-PA
           protein.
          Length = 543

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 17/77 (22%), Positives = 30/77 (38%)
 Frame = +3

Query: 3   QNDLQRSCSDETLIANDCTQNMXXXXXXXXXXXXXFVNVSCVLCTKKYDQYDDYVIHINE 182
           QN  Q+    + + ++  ++N+                 SC LC K + +    + HI  
Sbjct: 93  QNSQQQQQQQQQMQSSSSSENLQSQDDSEDVDLIFNEEGSCPLCNKTFSRKSSLMTHIRN 152

Query: 183 CTMNVKLQHFVCPICHE 233
            +   K   FVC  CH+
Sbjct: 153 HSAERK---FVCTYCHK 166


>AE014297-4516|AAF56994.1|  457|Drosophila melanogaster CG7928-PA
           protein.
          Length = 457

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 12/47 (25%), Positives = 21/47 (44%)
 Frame = +3

Query: 108 FVNVSCVLCTKKYDQYDDYVIHINECTMNVKLQHFVCPICHEMYTEK 248
           F    C  C K    Y  ++ H+     +  ++ F CP+C E ++ K
Sbjct: 281 FPGYVCDQCGKTLQSYSGFIGHLQN---HEPVKQFACPVCPERFSRK 324


>AE013599-3102|AAM68188.1|  889|Drosophila melanogaster CG10543-PB,
           isoform B protein.
          Length = 889

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = +3

Query: 123 CVLCTKKYDQYDDYVIHINECTMNVKLQHFVCPICHEMYTEK 248
           C  C ++     + +IH N  TM+VK   FVC  C E Y+ K
Sbjct: 6   CHDCGQRNGNTLEEIIHHNR-TMHVKEFPFVCETCGESYSRK 46


>AE013599-3101|AAO41340.1| 1024|Drosophila melanogaster CG10543-PC,
           isoform C protein.
          Length = 1024

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = +3

Query: 123 CVLCTKKYDQYDDYVIHINECTMNVKLQHFVCPICHEMYTEK 248
           C  C ++     + +IH N  TM+VK   FVC  C E Y+ K
Sbjct: 141 CHDCGQRNGNTLEEIIHHNR-TMHVKEFPFVCETCGESYSRK 181


>AE013599-3100|AAF46652.3| 1634|Drosophila melanogaster CG10543-PA,
           isoform A protein.
          Length = 1634

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = +3

Query: 123 CVLCTKKYDQYDDYVIHINECTMNVKLQHFVCPICHEMYTEK 248
           C  C ++     + +IH N  TM+VK   FVC  C E Y+ K
Sbjct: 751 CHDCGQRNGNTLEEIIHHNR-TMHVKEFPFVCETCGESYSRK 791


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,255,014
Number of Sequences: 53049
Number of extensions: 676710
Number of successful extensions: 1562
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1491
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1561
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4147514904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)