Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0389.Seq
         (862 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z71266-8|CAA95846.2|  729|Caenorhabditis elegans Hypothetical pr...    37   0.021
AL132876-17|CAC48140.1|  934|Caenorhabditis elegans Hypothetical...    33   0.20 
U22832-3|AAA64508.2|  359|Caenorhabditis elegans Hypothetical pr...    33   0.35 
AF039720-5|AAB96696.1|  408|Caenorhabditis elegans Hypothetical ...    31   0.80 
AF038612-3|AAB92045.2|  432|Caenorhabditis elegans Hypothetical ...    29   4.3  
Z37140-5|CAA85499.1|  312|Caenorhabditis elegans Hypothetical pr...    28   7.4  
Z37140-4|CAA85498.1|  308|Caenorhabditis elegans Hypothetical pr...    28   7.4  
AC024826-17|AAF60789.1|  662|Caenorhabditis elegans Hypothetical...    28   7.4  
Z81489-4|CAB04010.1|  361|Caenorhabditis elegans Hypothetical pr...    28   9.8  
Z66563-2|CAA91469.3| 2557|Caenorhabditis elegans Hypothetical pr...    28   9.8  
AL132904-23|CAC35839.2|  312|Caenorhabditis elegans Hypothetical...    28   9.8  
AL132904-7|CAC35838.1|  430|Caenorhabditis elegans Hypothetical ...    28   9.8  

>Z71266-8|CAA95846.2|  729|Caenorhabditis elegans Hypothetical
           protein R06C7.9 protein.
          Length = 729

 Score = 36.7 bits (81), Expect = 0.021
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = +3

Query: 120 SCVLCTKKYDQYDDYVIHINECTMNV-KLQHFVCPICHEMY 239
           +CVLC KKY  Y   + H  +C     ++Q F C +C+  Y
Sbjct: 306 ACVLCGKKYQHYHWLLKHRTKCLETTDEIQEFKCNVCYRRY 346


>AL132876-17|CAC48140.1|  934|Caenorhabditis elegans Hypothetical
           protein Y105E8A.21 protein.
          Length = 934

 Score = 33.5 bits (73), Expect = 0.20
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +3

Query: 117 VSCVLCTKKYDQYDDYVIHINECTMNVKLQHFVCPIC 227
           V C++C K+Y  +   + HI+ C ++  LQ + C  C
Sbjct: 218 VKCLVCDKEYTNHMSIIYHIDRCQVDKSLQPWKCWRC 254


>U22832-3|AAA64508.2|  359|Caenorhabditis elegans Hypothetical
           protein C09F5.3 protein.
          Length = 359

 Score = 32.7 bits (71), Expect = 0.35
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +3

Query: 117 VSCVLCTKKYDQYDDYVIHINECTMNVKLQHFVCPIC 227
           V+C  C   ++ +  + IH+     +V  Q F CPIC
Sbjct: 119 VACQQCEDTFEDFAQFAIHMKSHLSSVTSQLFFCPIC 155


>AF039720-5|AAB96696.1|  408|Caenorhabditis elegans Hypothetical
           protein F33D11.2 protein.
          Length = 408

 Score = 31.5 bits (68), Expect = 0.80
 Identities = 19/52 (36%), Positives = 27/52 (51%)
 Frame = +2

Query: 341 PIYSKAKPKSARRQIGWSVEDIYQEIDFKPAEQKSTPTSSPLKNFFSKLGNE 496
           P+   AKP++ R+Q   S  +I  E+D KPAE K      P  N   +LG +
Sbjct: 82  PVLENAKPRTIRKQK--STAEI--ELDSKPAEPKIVKQPIPAANLKGQLGTK 129


>AF038612-3|AAB92045.2|  432|Caenorhabditis elegans Hypothetical
           protein F13B6.3 protein.
          Length = 432

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 7/79 (8%)
 Frame = +2

Query: 320 GEDCVDFPIYSKAKPKSARRQIGWSVED------IYQEIDFKPA-EQKSTPTSSPLKNFF 478
           G D   F  Y    PKS R+Q+ W  ++      +    +++ A E+ + P S   K +F
Sbjct: 48  GSDAAQFEKYGVYDPKSTRQQLKWPTKESINGTSLDASKEYRIAFEKDNKPISQKGKVYF 107

Query: 479 SKLGNE*VYVQCMPHMYHV 535
           +K     VY+ C+   Y V
Sbjct: 108 AKNDTVDVYL-CIKEAYMV 125


>Z37140-5|CAA85499.1|  312|Caenorhabditis elegans Hypothetical
           protein ZK899.6 protein.
          Length = 312

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +3

Query: 117 VSCVLCTKKYDQYDDYVIHINECTMNVK 200
           + C  C+ K+D    ++ HI+EC  N K
Sbjct: 33  LQCSDCSSKFDSEIPFIQHIDECLENAK 60


>Z37140-4|CAA85498.1|  308|Caenorhabditis elegans Hypothetical
           protein ZK899.5 protein.
          Length = 308

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +3

Query: 117 VSCVLCTKKYDQYDDYVIHINECTMNVK 200
           + C  C+ K+D    ++ HI+EC  N K
Sbjct: 33  LQCSDCSSKFDSEIPFIQHIDECLENAK 60


>AC024826-17|AAF60789.1|  662|Caenorhabditis elegans Hypothetical
           protein Y55F3AM.14 protein.
          Length = 662

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 13/46 (28%), Positives = 21/46 (45%)
 Frame = +3

Query: 114 NVSCVLCTKKYDQYDDYVIHINECTMNVKLQHFVCPICHEMYTEKL 251
           N  C  C KKY       IH+ + T   +   + C  C + Y++K+
Sbjct: 355 NYECTFCNKKYPYASSLYIHMRKHT---EKSAYSCDGCGKPYSQKI 397


>Z81489-4|CAB04010.1|  361|Caenorhabditis elegans Hypothetical
           protein C55A1.5 protein.
          Length = 361

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +2

Query: 365 KSARRQIGWSVEDIYQEIDFKPAEQKSTPTSS 460
           KSA+R +   ++ IY+ +D +P   + T TSS
Sbjct: 320 KSAKRILKIMMDSIYKSLDLQPTRVEQTRTSS 351


>Z66563-2|CAA91469.3| 2557|Caenorhabditis elegans Hypothetical protein
            F46C3.3 protein.
          Length = 2557

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
 Frame = +2

Query: 332  VDFPIYSKAKPKSARRQIGWSVEDIYQEIDF--KPAEQ 439
            +DF      KPK  ++Q  W+ EDI Q + F  KP  Q
Sbjct: 2050 IDFATKYFRKPKDKKKQETWAWEDISQIVRFSEKPISQ 2087


>AL132904-23|CAC35839.2|  312|Caenorhabditis elegans Hypothetical
           protein Y111B2A.10b protein.
          Length = 312

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 12/43 (27%), Positives = 23/43 (53%)
 Frame = +3

Query: 120 SCVLCTKKYDQYDDYVIHINECTMNVKLQHFVCPICHEMYTEK 248
           +CV+C+K +   +   IH ++     +L+H  C +C + Y  K
Sbjct: 29  TCVMCSKAFPNAEALQIHTDQVHDLSRLKH-RCKLCGKAYKRK 70


>AL132904-7|CAC35838.1|  430|Caenorhabditis elegans Hypothetical
           protein Y111B2A.10a protein.
          Length = 430

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 12/43 (27%), Positives = 23/43 (53%)
 Frame = +3

Query: 120 SCVLCTKKYDQYDDYVIHINECTMNVKLQHFVCPICHEMYTEK 248
           +CV+C+K +   +   IH ++     +L+H  C +C + Y  K
Sbjct: 147 TCVMCSKAFPNAEALQIHTDQVHDLSRLKH-RCKLCGKAYKRK 188


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,046,649
Number of Sequences: 27780
Number of extensions: 368441
Number of successful extensions: 900
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 879
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 900
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2150453690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)