Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0385.Seq
         (845 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7SUZ6 Cluster: Predicted protein; n=2; Eukaryota|Rep: ...    49   2e-04
UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY0513...    42   0.019
UniRef50_Q2QAU1 Cluster: Transporter; n=2; Didelphinae|Rep: Tran...    37   0.73 
UniRef50_A4S1P1 Cluster: Predicted protein; n=1; Ostreococcus lu...    33   6.8  

>UniRef50_A7SUZ6 Cluster: Predicted protein; n=2; Eukaryota|Rep:
           Predicted protein - Nematostella vectensis
          Length = 79

 Score = 48.8 bits (111), Expect = 2e-04
 Identities = 27/51 (52%), Positives = 28/51 (54%)
 Frame = -3

Query: 246 FHQSRTKFRGSKAIRYRPSSNRKYVI*RSADVTTMARRAASGKPKILDSGG 94
           F   RTK RGSK IRYRPSSN K       +   M   A  GKPK L SGG
Sbjct: 6   FRCQRTKVRGSKTIRYRPSSNHKRCRLGIRECYWMTSLAPYGKPKFLGSGG 56


>UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY05130;
           n=6; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY05130 - Plasmodium yoelii yoelii
          Length = 402

 Score = 41.9 bits (94), Expect = 0.019
 Identities = 18/27 (66%), Positives = 22/27 (81%)
 Frame = +2

Query: 251 LCKCFR*CSSCDDPRISPLTSQYECPQ 331
           L KCFR C S ++ RISPLTS+Y+CPQ
Sbjct: 258 LGKCFRSCLSPENLRISPLTSEYKCPQ 284


>UniRef50_Q2QAU1 Cluster: Transporter; n=2; Didelphinae|Rep:
           Transporter - Didelphis marsupialis virginiana (North
           American opossum)
          Length = 618

 Score = 36.7 bits (81), Expect = 0.73
 Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 3/86 (3%)
 Frame = +2

Query: 308 TSQYECPQLSLLIITSEF*KPTK*--NRDHILLF-HARNIQAAFLARFEHSNLFKVKLSA 478
           T  +EC   ++L I +EF  P +     D++  F H  + Q+    R  H  L    L  
Sbjct: 318 TDYWECLDRNILSIINEFDFPDQSIQREDYVACFTHLNSTQSD---RMAHLQLKSCHLQD 374

Query: 479 HLDTSPKSTGIGILIFEPAFFRTPGS 556
            LD S   TG+  ++F  A    PGS
Sbjct: 375 FLDKSASGTGLAFIVFTEAIVHMPGS 400


>UniRef50_A4S1P1 Cluster: Predicted protein; n=1; Ostreococcus
           lucimarinus CCE9901|Rep: Predicted protein -
           Ostreococcus lucimarinus CCE9901
          Length = 72

 Score = 33.5 bits (73), Expect = 6.8
 Identities = 15/23 (65%), Positives = 15/23 (65%)
 Frame = -3

Query: 246 FHQSRTKFRGSKAIRYRPSSNRK 178
           FH  RTK  GSK IRY PS N K
Sbjct: 6   FHCQRTKVGGSKMIRYHPSLNHK 28


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 743,940,946
Number of Sequences: 1657284
Number of extensions: 14202003
Number of successful extensions: 34495
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 33354
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34486
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 74193458591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)