Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0385.Seq
         (845 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    24   1.3  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    23   4.0  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   7.0  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    21   9.3  

>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = +1

Query: 478 PPRHFTEEHRHR 513
           PPRHF EEH  R
Sbjct: 258 PPRHFHEEHDTR 269


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -3

Query: 504 VLFGEVSRWADNFTLNKLECSKRAKNAA*IFRAWNN 397
           VL GEV  W++    + LE     ++AA   R W++
Sbjct: 505 VLGGEVCLWSEQVGPDSLETRIWPRSAAFAERIWSD 540


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = -3

Query: 504 VLFGEVSRWADNFTLNKLECSKRAKNAA*IFRAWNN 397
           +L GE   W++ F    L+     + AA   R W++
Sbjct: 547 ILGGEACLWSEQFDETSLDTRLWPRAAAFAERVWSD 582


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -1

Query: 272 ISESICKGVFINQERNLEVRRR 207
           + +S C+ V I + R L+ RR+
Sbjct: 212 LKQSTCEAVMILRSRFLDARRK 233


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,254
Number of Sequences: 336
Number of extensions: 3557
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23348025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)