Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0385.Seq
         (845 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D84430-1|BAA95608.1|  589|Homo sapiens phenylalanyl tRNA synthet...    30   9.2  
BC017783-1|AAH17783.1|  589|Homo sapiens phenylalanyl-tRNA synth...    30   9.2  
BC006502-1|AAH06502.2|  585|Homo sapiens FARSB protein protein.        30   9.2  
AF042346-1|AAD02220.1|  589|Homo sapiens putative phenylalanyl-t...    30   9.2  

>D84430-1|BAA95608.1|  589|Homo sapiens phenylalanyl tRNA synthetase
           protein.
          Length = 589

 Score = 30.3 bits (65), Expect = 9.2
 Identities = 15/42 (35%), Positives = 25/42 (59%)
 Frame = -3

Query: 609 VHPSAVNTDTFCRSISSVEPGVLKNAGSNIKIPMPVLFGEVS 484
           VH S   T  F  + +++ PG+LK   +N K+P+P+   E+S
Sbjct: 437 VHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLPLKLFEIS 478


>BC017783-1|AAH17783.1|  589|Homo sapiens phenylalanyl-tRNA
           synthetase, beta subunit protein.
          Length = 589

 Score = 30.3 bits (65), Expect = 9.2
 Identities = 15/42 (35%), Positives = 25/42 (59%)
 Frame = -3

Query: 609 VHPSAVNTDTFCRSISSVEPGVLKNAGSNIKIPMPVLFGEVS 484
           VH S   T  F  + +++ PG+LK   +N K+P+P+   E+S
Sbjct: 437 VHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLPLKLFEIS 478


>BC006502-1|AAH06502.2|  585|Homo sapiens FARSB protein protein.
          Length = 585

 Score = 30.3 bits (65), Expect = 9.2
 Identities = 15/42 (35%), Positives = 25/42 (59%)
 Frame = -3

Query: 609 VHPSAVNTDTFCRSISSVEPGVLKNAGSNIKIPMPVLFGEVS 484
           VH S   T  F  + +++ PG+LK   +N K+P+P+   E+S
Sbjct: 433 VHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLPLKLFEIS 474


>AF042346-1|AAD02220.1|  589|Homo sapiens putative phenylalanyl-tRNA
           synthetase beta-subunit protein.
          Length = 589

 Score = 30.3 bits (65), Expect = 9.2
 Identities = 15/42 (35%), Positives = 25/42 (59%)
 Frame = -3

Query: 609 VHPSAVNTDTFCRSISSVEPGVLKNAGSNIKIPMPVLFGEVS 484
           VH S   T  F  + +++ PG+LK   +N K+P+P+   E+S
Sbjct: 437 VHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLPLKLFEIS 478


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,579,767
Number of Sequences: 237096
Number of extensions: 2230697
Number of successful extensions: 4784
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4476
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4784
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10705443456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)