Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0382.Seq
(790 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5PMJ0 Cluster: Virulence sensor histidine kinase phoQ;... 105 2e-21
UniRef50_A7MFU1 Cluster: Putative uncharacterized protein; n=1; ... 91 4e-17
UniRef50_Q5PMJ1 Cluster: Virulence transcriptional regulatory pr... 58 3e-07
UniRef50_Q6D4E6 Cluster: Two-component response regulator of vir... 53 7e-06
UniRef50_Q09JM0 Cluster: 10 kDa putative secreted protein; n=1; ... 49 2e-04
UniRef50_UPI000155D43F Cluster: PREDICTED: similar to Phosphatid... 39 0.16
UniRef50_UPI0000D99A8A Cluster: PREDICTED: hypothetical protein;... 36 1.2
UniRef50_A5ED47 Cluster: Putative transcriptional regulatory pro... 35 2.7
UniRef50_Q5JNT2 Cluster: 3'-N-debenzoyltaxol N-benzoyltransferas... 33 6.2
UniRef50_Q2IDJ4 Cluster: Transcriptional regulator, CadC; n=1; A... 33 8.2
UniRef50_A6G4W1 Cluster: Phenylalanyl-tRNA synthetase, beta subu... 33 8.2
UniRef50_A0VJZ3 Cluster: Putative uncharacterized protein; n=1; ... 33 8.2
UniRef50_Q9NSC2 Cluster: Sal-like protein 1; n=39; cellular orga... 33 8.2
>UniRef50_Q5PMJ0 Cluster: Virulence sensor histidine kinase phoQ;
n=47; Enterobacteriaceae|Rep: Virulence sensor histidine
kinase phoQ - Salmonella paratyphi-a
Length = 487
Score = 105 bits (251), Expect = 2e-21
Identities = 43/58 (74%), Positives = 52/58 (89%)
Frame = +2
Query: 509 NNKLHVELPENIDKQSPTMTLIYDENGQLLWAQRDVPWLMKMIQPDWLKSIGFHEIES 682
NNK+ VELPEN+D QSPTMTLIYDE G+LLW QR++PWL+K IQP+WLK+ GFHEIE+
Sbjct: 67 NNKISVELPENLDMQSPTMTLIYDETGKLLWTQRNIPWLIKSIQPEWLKTNGFHEIET 124
Score = 81.8 bits (193), Expect = 2e-14
Identities = 56/155 (36%), Positives = 71/155 (45%)
Frame = +3
Query: 312 MKKLLRLFFPLSXXXXXXXXXXXXXXXXXXXYGMVALIGYSVSFDKTTFRLLRGESNLFY 491
M K R F PLS YG+VAL+GYSVSFDKTTFRLLRGESNLFY
Sbjct: 1 MNKFARHFLPLSLRVRFLLATAGVVLVLSLAYGIVALVGYSVSFDKTTFRLLRGESNLFY 60
Query: 492 TLAKWETISCMSSYPKISTSKAPP*R*FMMRTGSFYGRNVTCPG**R*SSLTG*NRLVFM 671
TLAKWE P+ ++P TG P + F
Sbjct: 61 TLAKWENNKISVELPENLDMQSPTMTLIYDETGKLLWTQRNIPWLIKSIQPEWLKTNGFH 120
Query: 672 KLKADVNDXNPLC*MGDHSIQQQLQEXPGRXXDPE 776
+++ +V+ + L DHS Q++L+E D E
Sbjct: 121 EIETNVDATSTLL-SEDHSAQEKLKEVREDDDDAE 154
>UniRef50_A7MFU1 Cluster: Putative uncharacterized protein; n=1;
Enterobacter sakazakii ATCC BAA-894|Rep: Putative
uncharacterized protein - Enterobacter sakazakii ATCC
BAA-894
Length = 501
Score = 90.6 bits (215), Expect = 4e-17
Identities = 37/58 (63%), Positives = 50/58 (86%)
Frame = +2
Query: 509 NNKLHVELPENIDKQSPTMTLIYDENGQLLWAQRDVPWLMKMIQPDWLKSIGFHEIES 682
N KL VE+P++ID+QSPT+T IY+E G+LLW+QRDVP LMK I+P+WL + GFHE+E+
Sbjct: 68 NGKLTVEIPDHIDRQSPTLTFIYNEKGKLLWSQRDVPRLMKAIRPEWLNANGFHELET 125
Score = 76.2 bits (179), Expect = 9e-13
Identities = 38/67 (56%), Positives = 44/67 (65%)
Frame = +3
Query: 309 LMKKLLRLFFPLSXXXXXXXXXXXXXXXXXXXYGMVALIGYSVSFDKTTFRLLRGESNLF 488
+ K +LR F PLS YG+VAL+GYSVSFDKTTFRLLRGESNLF
Sbjct: 1 MKKNVLRHFLPLSLRVRFLLATAAVVLVLSLAYGVVALVGYSVSFDKTTFRLLRGESNLF 60
Query: 489 YTLAKWE 509
YTLA++E
Sbjct: 61 YTLARFE 67
>UniRef50_Q5PMJ1 Cluster: Virulence transcriptional regulatory
protein phoP; n=103; Proteobacteria|Rep: Virulence
transcriptional regulatory protein phoP - Salmonella
paratyphi-a
Length = 224
Score = 57.6 bits (133), Expect = 3e-07
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = +3
Query: 111 IMETLIRNNGKVVSKDSLMLQLYPDAE 191
IMETLIRNNGKVVSKDSLMLQLYPDAE
Sbjct: 158 IMETLIRNNGKVVSKDSLMLQLYPDAE 184
Score = 48.0 bits (109), Expect = 3e-04
Identities = 21/23 (91%), Positives = 23/23 (100%)
Frame = +2
Query: 191 VRESHTIDVLMGRLRKKIQAQFP 259
+RESHTIDVLMGRLRKKIQAQ+P
Sbjct: 185 LRESHTIDVLMGRLRKKIQAQYP 207
Score = 39.1 bits (87), Expect = 0.12
Identities = 18/29 (62%), Positives = 20/29 (68%)
Frame = +1
Query: 223 GTSAQKNSGTIPQEVITTVRGQGYLFELR 309
G +K P +VITTVRGQGYLFELR
Sbjct: 196 GRLRKKIQAQYPHDVITTVRGQGYLFELR 224
>UniRef50_Q6D4E6 Cluster: Two-component response regulator of
virulence determinants; n=4; Enterobacteriaceae|Rep:
Two-component response regulator of virulence
determinants - Erwinia carotovora subsp. atroseptica
(Pectobacterium atrosepticum)
Length = 229
Score = 53.2 bits (122), Expect = 7e-06
Identities = 28/39 (71%), Positives = 31/39 (79%)
Frame = +3
Query: 75 APSGLTPRPFCAIMETLIRNNGKVVSKDSLMLQLYPDAE 191
AP LT + I+ETLIRN GKVVSK+SLMLQLYPDAE
Sbjct: 146 APIKLTAFEY-TIIETLIRNKGKVVSKESLMLQLYPDAE 183
Score = 40.3 bits (90), Expect = 0.054
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +2
Query: 191 VRESHTIDVLMGRLRKKIQ 247
+RESHTIDVLMGRLRKKIQ
Sbjct: 184 LRESHTIDVLMGRLRKKIQ 202
>UniRef50_Q09JM0 Cluster: 10 kDa putative secreted protein; n=1;
Argas monolakensis|Rep: 10 kDa putative secreted protein
- Argas monolakensis
Length = 102
Score = 48.8 bits (111), Expect = 2e-04
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = -1
Query: 109 AQKGLGVSPLGASVGADLGGSSKYSSEALED 17
A K GVSP GA+ GADLGGSSKYSSE LED
Sbjct: 72 ALKVSGVSPPGAAAGADLGGSSKYSSETLED 102
>UniRef50_UPI000155D43F Cluster: PREDICTED: similar to
Phosphatidylinositol glycan anchor biosynthesis, class
F, partial; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to Phosphatidylinositol glycan anchor
biosynthesis, class F, partial - Ornithorhynchus
anatinus
Length = 403
Score = 38.7 bits (86), Expect = 0.16
Identities = 18/28 (64%), Positives = 21/28 (75%)
Frame = -2
Query: 87 ARLEPPSVQILVVVANTPARPWRTDVEK 4
AR+EPP VQILVVVAN R + +VEK
Sbjct: 28 ARVEPPQVQILVVVANIQTRALKAEVEK 55
>UniRef50_UPI0000D99A8A Cluster: PREDICTED: hypothetical protein;
n=1; Macaca mulatta|Rep: PREDICTED: hypothetical protein
- Macaca mulatta
Length = 86
Score = 35.9 bits (79), Expect = 1.2
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = -2
Query: 84 RLEPPSVQILVVVANTPARPWRTDVEKG 1
R EPP VQILV+V N R + +VEKG
Sbjct: 57 RAEPPQVQILVIVVNIQRRTSKAEVEKG 84
>UniRef50_A5ED47 Cluster: Putative transcriptional regulatory
protein; n=1; Bradyrhizobium sp. BTAi1|Rep: Putative
transcriptional regulatory protein - Bradyrhizobium sp.
(strain BTAi1 / ATCC BAA-1182)
Length = 972
Score = 34.7 bits (76), Expect = 2.7
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +3
Query: 78 PSGLTPRPFCAIMETLIRNNGKVVSKDSLMLQLYPDA 188
P L R F IME LI++ GK+V+KD L+ Q++P A
Sbjct: 51 PVPLGGRAF-EIMEVLIKSEGKLVTKDELLSQVWPGA 86
>UniRef50_Q5JNT2 Cluster: 3'-N-debenzoyltaxol
N-benzoyltransferase-like; n=5; Oryza sativa|Rep:
3'-N-debenzoyltaxol N-benzoyltransferase-like - Oryza
sativa subsp. japonica (Rice)
Length = 439
Score = 33.5 bits (73), Expect = 6.2
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = -2
Query: 402 QAKAPVLPLPLPTENVPAARAGKKDAVIFSSAQFEQIALAANGGNHFLGNC 250
QA+ L LP PT V ++ +A + A NGGN F GNC
Sbjct: 260 QARTRALRLPEPTSRVNLCFFANTRHLMAGAAAWPAPAAGGNGGNGFYGNC 310
>UniRef50_Q2IDJ4 Cluster: Transcriptional regulator, CadC; n=1;
Anaeromyxobacter dehalogenans 2CP-C|Rep: Transcriptional
regulator, CadC - Anaeromyxobacter dehalogenans (strain
2CP-C)
Length = 396
Score = 33.1 bits (72), Expect = 8.2
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +3
Query: 75 APSGLTPRPFCAIMETLIRNNGKVVSKDSLMLQLYPDA 188
AP L P A++ L+RN +VV K+ L+ +L+PDA
Sbjct: 25 APRALQPLVL-AVLAYLVRNRHRVVPKEELLRELWPDA 61
>UniRef50_A6G4W1 Cluster: Phenylalanyl-tRNA synthetase, beta
subunit; n=1; Plesiocystis pacifica SIR-1|Rep:
Phenylalanyl-tRNA synthetase, beta subunit -
Plesiocystis pacifica SIR-1
Length = 851
Score = 33.1 bits (72), Expect = 8.2
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
Frame = -1
Query: 259 GELCLNFFAQTSHQYINGMAFPHSASG*SWSINESLLTTLPLLRINVSIIAQ-KGLGVSP 83
GEL L A Y + FP SA S +++++ + I + +A+ G G P
Sbjct: 715 GELWLEALADVEVAYADAPRFPSSARDLSLDLSDAISACDAISAIRTAYLARDAGEGDDP 774
Query: 82 LGASVGADLGGSSKYSSEALED*RGKG 2
+ + AD G + EA ED RG G
Sbjct: 775 VRLASAADASG-LRGGLEAREDYRGAG 800
>UniRef50_A0VJZ3 Cluster: Putative uncharacterized protein; n=1;
Delftia acidovorans SPH-1|Rep: Putative uncharacterized
protein - Delftia acidovorans SPH-1
Length = 129
Score = 33.1 bits (72), Expect = 8.2
Identities = 18/31 (58%), Positives = 20/31 (64%)
Frame = +3
Query: 60 SAPTEAPSGLTPRPFCAIMETLIRNNGKVVS 152
+APT PS L P PFC T IR+NGKV S
Sbjct: 3 TAPT--PSELLPCPFCGAGNTEIRDNGKVWS 31
>UniRef50_Q9NSC2 Cluster: Sal-like protein 1; n=39; cellular
organisms|Rep: Sal-like protein 1 - Homo sapiens (Human)
Length = 1324
Score = 33.1 bits (72), Expect = 8.2
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +3
Query: 51 PPRSAPTEAPSGLTPRPF-CAIMETLIRNNGKVVSKDSLMLQLYPDAECGKAIPLMY*WD 227
P R+ P+E +GL+P P ++ + K++ +DSL + L+P + GK D
Sbjct: 948 PQRAVPSEFANGLSPTPVNGGALDLTSSHAEKIIKEDSLGI-LFPFRDRGKFKNTA--CD 1004
Query: 228 VCAKKFRHNSPRSDYHRS 281
+C K F S ++RS
Sbjct: 1005 ICGKTFACQSALDIHYRS 1022
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 844,636,840
Number of Sequences: 1657284
Number of extensions: 18212556
Number of successful extensions: 51830
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 49397
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51814
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 67085240885
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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