Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0382.Seq
         (790 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    25   0.91 
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    25   0.91 
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    25   0.91 
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          22   4.9  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    22   4.9  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           22   4.9  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    22   6.4  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    22   6.4  

>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 24.6 bits (51), Expect = 0.91
 Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 9/56 (16%)
 Frame = +2

Query: 506 GNNKLHVELPENID---------KQSPTMTLIYDENGQLLWAQRDVPWLMKMIQPD 646
           G N  H++LP+++D         +Q     LI   NG++++    V  L+  +Q D
Sbjct: 87  GKNHPHIQLPKHVDQYLLEQLVCEQLGGFLLILTPNGKIVFVSHTVEHLLGHLQTD 142


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 24.6 bits (51), Expect = 0.91
 Identities = 13/49 (26%), Positives = 25/49 (51%)
 Frame = -2

Query: 435 RYNRSARPFRRQAKAPVLPLPLPTENVPAARAGKKDAVIFSSAQFEQIA 289
           ++ +  + FRRQ K+  L +  P       R  K+D V FS  + ++++
Sbjct: 213 KFEQINQHFRRQIKSVDLFVIFPLTKAEKVRNLKEDEVTFSVQKIQELS 261


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 24.6 bits (51), Expect = 0.91
 Identities = 13/49 (26%), Positives = 25/49 (51%)
 Frame = -2

Query: 435 RYNRSARPFRRQAKAPVLPLPLPTENVPAARAGKKDAVIFSSAQFEQIA 289
           ++ +  + FRRQ K+  L +  P       R  K+D V FS  + ++++
Sbjct: 169 KFEQINQHFRRQIKSVDLFVIFPLTKAEKVRNLKEDEVTFSVQKIQELS 217


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 54  PRSAPTEAPSGLTPR 98
           PRS+P E  S L+P+
Sbjct: 154 PRSSPAETASSLSPQ 168


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 7/14 (50%), Positives = 7/14 (50%)
 Frame = +2

Query: 581 ENGQLLWAQRDVPW 622
           EN  L W   D PW
Sbjct: 216 ENSPLYWGGADTPW 229


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 54  PRSAPTEAPSGLTPR 98
           PRS+P E  S L+P+
Sbjct: 145 PRSSPAETASSLSPQ 159


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 667 KTNRFQPVRLDHLHQPGH 614
           K N  + V+L HLHQ  H
Sbjct: 118 KFNPHEEVKLQHLHQFPH 135


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = +2

Query: 365 VGNGSGSTGAFACL 406
           VGN SG T  F CL
Sbjct: 280 VGNASGYTVTFLCL 293


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,567
Number of Sequences: 336
Number of extensions: 4483
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21376414
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)