Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0379.Seq
         (470 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3; Eukaryo...    64   1e-09
UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1; ...    53   4e-06
UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular organ...    53   4e-06
UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: L...    53   4e-06
UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep: Bet...    53   4e-06
UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:...    41   0.016
UniRef50_P06219 Cluster: Beta-galactosidase; n=11; Gammaproteoba...    38   0.084
UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1; ...    35   1.0  
UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia sp...    34   1.4  
UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1; ...    34   1.8  
UniRef50_UPI0001561008 Cluster: PREDICTED: similar to pMLZ-4; n=...    32   7.3  

>UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3;
           Eukaryota|Rep: beta-galactosidase - Entamoeba
           histolytica HM-1:IMSS
          Length = 86

 Score = 64.1 bits (149), Expect = 1e-09
 Identities = 28/30 (93%), Positives = 28/30 (93%)
 Frame = +1

Query: 256 WPSFYNVVTGXTLAXPNLIALQHIPLSPAG 345
           WPSFYNVVTG TLA PNLIALQHIPLSPAG
Sbjct: 6   WPSFYNVVTGKTLALPNLIALQHIPLSPAG 35


>UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1;
           Erwinia amylovora|Rep: Putative uncharacterized protein
           - Erwinia amylovora (Fire blight bacteria)
          Length = 123

 Score = 52.8 bits (121), Expect = 4e-06
 Identities = 21/24 (87%), Positives = 21/24 (87%)
 Frame = +3

Query: 273 RXDWXNPGVXQLNRLAAHPPFASW 344
           R DW NPGV QLNRLAAHPPFASW
Sbjct: 74  RRDWENPGVTQLNRLAAHPPFASW 97



 Score = 33.5 bits (73), Expect = 2.4
 Identities = 17/27 (62%), Positives = 18/27 (66%)
 Frame = +2

Query: 332 FRQLGNSEXARTXRPSQQLRX*MGXWQ 412
           F    NSE ART RPSQQLR   G W+
Sbjct: 94  FASWRNSEEARTDRPSQQLRXLNGEWR 120


>UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular
           organisms|Rep: LacZ-alpha peptide - Escherichia coli
          Length = 90

 Score = 52.8 bits (121), Expect = 4e-06
 Identities = 21/24 (87%), Positives = 21/24 (87%)
 Frame = +3

Query: 273 RXDWXNPGVXQLNRLAAHPPFASW 344
           R DW NPGV QLNRLAAHPPFASW
Sbjct: 28  RRDWENPGVTQLNRLAAHPPFASW 51


>UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: LacZ
           protein - Phage M13mp18
          Length = 102

 Score = 52.8 bits (121), Expect = 4e-06
 Identities = 21/24 (87%), Positives = 21/24 (87%)
 Frame = +3

Query: 273 RXDWXNPGVXQLNRLAAHPPFASW 344
           R DW NPGV QLNRLAAHPPFASW
Sbjct: 32  RRDWENPGVTQLNRLAAHPPFASW 55



 Score = 33.5 bits (73), Expect = 2.4
 Identities = 16/27 (59%), Positives = 17/27 (62%)
 Frame = +2

Query: 332 FRQLGNSEXARTXRPSQQLRX*MGXWQ 412
           F    NSE ART RPSQQLR   G W+
Sbjct: 52  FASWRNSEEARTDRPSQQLRSLNGEWR 78


>UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep:
           Beta-galactosidase - Escherichia coli (strain K12)
          Length = 1024

 Score = 52.8 bits (121), Expect = 4e-06
 Identities = 21/24 (87%), Positives = 21/24 (87%)
 Frame = +3

Query: 273 RXDWXNPGVXQLNRLAAHPPFASW 344
           R DW NPGV QLNRLAAHPPFASW
Sbjct: 14  RRDWENPGVTQLNRLAAHPPFASW 37



 Score = 33.5 bits (73), Expect = 2.4
 Identities = 16/27 (59%), Positives = 17/27 (62%)
 Frame = +2

Query: 332 FRQLGNSEXARTXRPSQQLRX*MGXWQ 412
           F    NSE ART RPSQQLR   G W+
Sbjct: 34  FASWRNSEEARTDRPSQQLRSLNGEWR 60


>UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:
           Beta-galactosidase - Yersinia pseudotuberculosis
          Length = 1066

 Score = 40.7 bits (91), Expect = 0.016
 Identities = 15/24 (62%), Positives = 17/24 (70%)
 Frame = +3

Query: 273 RXDWXNPGVXQLNRLAAHPPFASW 344
           R DW NP + Q +RL AHPPF SW
Sbjct: 21  RRDWENPQITQYHRLEAHPPFHSW 44


>UniRef50_P06219 Cluster: Beta-galactosidase; n=11;
           Gammaproteobacteria|Rep: Beta-galactosidase - Klebsiella
           pneumoniae
          Length = 1034

 Score = 38.3 bits (85), Expect = 0.084
 Identities = 15/24 (62%), Positives = 16/24 (66%)
 Frame = +3

Query: 273 RXDWXNPGVXQLNRLAAHPPFASW 344
           R DW N  +  LNRL AHP FASW
Sbjct: 20  REDWHNQTITHLNRLPAHPVFASW 43


>UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1;
           Enterobacter sakazakii ATCC BAA-894|Rep: Putative
           uncharacterized protein - Enterobacter sakazakii ATCC
           BAA-894
          Length = 1043

 Score = 34.7 bits (76), Expect = 1.0
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +3

Query: 273 RXDWXNPGVXQLNRLAAHPPFASWVIAXR 359
           R DW NP +  +NRL +H P   W  A R
Sbjct: 24  RNDWQNPAITSVNRLPSHTPLHGWRDADR 52


>UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia
           spumigena CCY 9414|Rep: Beta-D-galactosidase - Nodularia
           spumigena CCY 9414
          Length = 72

 Score = 34.3 bits (75), Expect = 1.4
 Identities = 15/24 (62%), Positives = 18/24 (75%)
 Frame = +2

Query: 347 NSEXARTXRPSQQLRX*MGXWQIV 418
           NSE ART RPSQQLR   G W+++
Sbjct: 49  NSEEARTDRPSQQLRSLNGEWRLM 72


>UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1;
           uncultured bacterium|Rep: Non-ribosomal peptide
           synthetase - uncultured bacterium
          Length = 338

 Score = 33.9 bits (74), Expect = 1.8
 Identities = 15/20 (75%), Positives = 16/20 (80%)
 Frame = -1

Query: 260 GQEL*YDSL*GELGTGPPLE 201
           G+   YDSL GELGTGPPLE
Sbjct: 273 GRRAYYDSLYGELGTGPPLE 292


>UniRef50_UPI0001561008 Cluster: PREDICTED: similar to pMLZ-4; n=1;
           Equus caballus|Rep: PREDICTED: similar to pMLZ-4 - Equus
           caballus
          Length = 249

 Score = 31.9 bits (69), Expect = 7.3
 Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 4/44 (9%)
 Frame = -1

Query: 437 LTKYXRXQFAXRPFXCATVGK----GXRCGPXRYYPAGERGMCC 318
           LT++ R Q   RPF CA  GK       CG  +    GER + C
Sbjct: 64  LTRHLRRQKGERPFWCALCGKRFGLSWDCGRHQVARTGERSIVC 107


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 352,201,103
Number of Sequences: 1657284
Number of extensions: 5387781
Number of successful extensions: 8731
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 8405
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8730
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 26030843530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)