Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0379.Seq
         (470 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    25   0.47 
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    23   1.9  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   4.3  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   5.7  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   5.7  

>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 24.6 bits (51), Expect = 0.47
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 208 GGPVPNSPYXESYYNSWPSFYNVV 279
           G P+P   Y E+   +W S +N V
Sbjct: 246 GDPIPYIQYTETETKTWGSVFNTV 269


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = +1

Query: 73  RYNPIVVXIKKTKFISRSYLNVS 141
           R NP    IK T F+S  Y N S
Sbjct: 219 RKNPNGCDIKATFFVSHKYTNYS 241


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +3

Query: 3   HNKLLIKFHIIYLNRIIFKHLL 68
           HN + +K  +IY NRI   ++L
Sbjct: 139 HNLIRLKNCVIYFNRIFGWNIL 160


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +1

Query: 73  RYNPIVVXIKKTKFISRSYLNVS 141
           R NP    I+ T F+S  Y N S
Sbjct: 211 RANPNGCQIRGTFFVSHKYTNYS 233


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +1

Query: 73  RYNPIVVXIKKTKFISRSYLNVS 141
           R NP    I+ T F+S  Y N S
Sbjct: 218 RANPNGCQIRGTFFVSHKYTNYS 240


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,865
Number of Sequences: 336
Number of extensions: 1477
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10931752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)