Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0379.Seq
         (470 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022881-1|AAY55297.1|  695|Drosophila melanogaster IP12933p pro...    27   9.7  
BT022856-1|AAY55272.1|  696|Drosophila melanogaster IP13133p pro...    27   9.7  
AE014297-1366|AAF54689.3|  686|Drosophila melanogaster CG12594-P...    27   9.7  

>BT022881-1|AAY55297.1|  695|Drosophila melanogaster IP12933p
           protein.
          Length = 695

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +1

Query: 214 PVPNSPYXESYYNSWPSFYNVVTGXTLAXPN 306
           P P++PY   Y  SW +  N     TL   N
Sbjct: 524 PTPSTPYNMGYIRSWRNLLNFTLMVTLRAKN 554


>BT022856-1|AAY55272.1|  696|Drosophila melanogaster IP13133p
           protein.
          Length = 696

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +1

Query: 214 PVPNSPYXESYYNSWPSFYNVVTGXTLAXPN 306
           P P++PY   Y  SW +  N     TL   N
Sbjct: 525 PTPSTPYNMGYIRSWRNLLNFTLMVTLRAKN 555


>AE014297-1366|AAF54689.3|  686|Drosophila melanogaster CG12594-PA
           protein.
          Length = 686

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +1

Query: 214 PVPNSPYXESYYNSWPSFYNVVTGXTLAXPN 306
           P P++PY   Y  SW +  N     TL   N
Sbjct: 515 PTPSTPYNMGYIRSWRNLLNFTLMVTLRAKN 545


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,860,050
Number of Sequences: 53049
Number of extensions: 255141
Number of successful extensions: 318
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 299
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 318
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1601407269
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)