Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0378.Seq
         (934 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X56438-1|CAA39820.1|  327|Drosophila melanogaster protein  phosp...    46   7e-05
BT016110-1|AAV36995.1|  327|Drosophila melanogaster LD14639p pro...    46   7e-05
AE014297-3560|AAF56306.1|  327|Drosophila melanogaster CG6593-PA...    46   7e-05
X56439-1|CAA39821.1|  330|Drosophila melanogaster protein phosph...    43   5e-04
AY095072-1|AAM11400.1|  330|Drosophila melanogaster RE17877p pro...    43   5e-04
AY069047-1|AAL39192.1|  461|Drosophila melanogaster GH05039p pro...    43   5e-04
AJ249214-1|CAB59732.1|  330|Drosophila melanogaster type 1 serin...    43   5e-04
AE014298-1450|AAF46583.2|  330|Drosophila melanogaster CG2096-PB...    43   5e-04
AE014298-1449|AAF46582.2|  461|Drosophila melanogaster CG2096-PA...    43   5e-04
X15583-1|CAA33609.1|  302|Drosophila melanogaster protein ( Frui...    36   0.11 
S47852-1|AAB23957.1|  302|Drosophila melanogaster protein phosph...    36   0.11 
AY061063-1|AAL28611.1|  302|Drosophila melanogaster LD03380p pro...    36   0.11 
AE014297-1518|AAF54810.1|  302|Drosophila melanogaster CG5650-PA...    36   0.11 
X69974-1|CAA49594.1|  302|Drosophila melanogaster serine /threon...    32   0.98 
AY060272-1|AAL25311.1|  302|Drosophila melanogaster GH10637p pro...    32   0.98 
AE014298-2139|AAF48448.1|  302|Drosophila melanogaster CG9156-PA...    32   0.98 
AE014297-3729|AAF56407.3|  828|Drosophila melanogaster CG11848-P...    30   5.2  
AE014297-2422|AAF55479.3| 2938|Drosophila melanogaster CG33547-P...    29   9.1  

>X56438-1|CAA39820.1|  327|Drosophila melanogaster protein
           phosphatase 1 protein.
          Length = 327

 Score = 46.0 bits (104), Expect = 7e-05
 Identities = 26/40 (65%), Positives = 29/40 (72%), Gaps = 3/40 (7%)
 Frame = +3

Query: 3   LMCSFQILKPADKRK--CDSGLNMGRPNTPPR-AQPKNKK 113
           LMCSFQILKPADKR+    +  + GRP TPPR A  KNKK
Sbjct: 287 LMCSFQILKPADKRRFVYPNFGSSGRPLTPPRGANNKNKK 326


>BT016110-1|AAV36995.1|  327|Drosophila melanogaster LD14639p
           protein.
          Length = 327

 Score = 46.0 bits (104), Expect = 7e-05
 Identities = 26/40 (65%), Positives = 29/40 (72%), Gaps = 3/40 (7%)
 Frame = +3

Query: 3   LMCSFQILKPADKRK--CDSGLNMGRPNTPPR-AQPKNKK 113
           LMCSFQILKPADKR+    +  + GRP TPPR A  KNKK
Sbjct: 287 LMCSFQILKPADKRRFVYPNFGSSGRPLTPPRGANNKNKK 326


>AE014297-3560|AAF56306.1|  327|Drosophila melanogaster CG6593-PA
           protein.
          Length = 327

 Score = 46.0 bits (104), Expect = 7e-05
 Identities = 26/40 (65%), Positives = 29/40 (72%), Gaps = 3/40 (7%)
 Frame = +3

Query: 3   LMCSFQILKPADKRK--CDSGLNMGRPNTPPR-AQPKNKK 113
           LMCSFQILKPADKR+    +  + GRP TPPR A  KNKK
Sbjct: 287 LMCSFQILKPADKRRFVYPNFGSSGRPLTPPRGANNKNKK 326


>X56439-1|CAA39821.1|  330|Drosophila melanogaster protein
           phosphatase  1 protein.
          Length = 330

 Score = 43.2 bits (97), Expect = 5e-04
 Identities = 20/35 (57%), Positives = 25/35 (71%), Gaps = 2/35 (5%)
 Frame = +3

Query: 3   LMCSFQILKPADKRK--CDSGLNMGRPNTPPRAQP 101
           LMCSFQILKP++K+     SG+N  RP TP R+ P
Sbjct: 288 LMCSFQILKPSEKKAKYLYSGMNSSRPTTPQRSAP 322


>AY095072-1|AAM11400.1|  330|Drosophila melanogaster RE17877p
           protein.
          Length = 330

 Score = 43.2 bits (97), Expect = 5e-04
 Identities = 20/35 (57%), Positives = 25/35 (71%), Gaps = 2/35 (5%)
 Frame = +3

Query: 3   LMCSFQILKPADKRK--CDSGLNMGRPNTPPRAQP 101
           LMCSFQILKP++K+     SG+N  RP TP R+ P
Sbjct: 288 LMCSFQILKPSEKKAKYLYSGMNSSRPTTPQRSAP 322


>AY069047-1|AAL39192.1|  461|Drosophila melanogaster GH05039p
           protein.
          Length = 461

 Score = 43.2 bits (97), Expect = 5e-04
 Identities = 20/35 (57%), Positives = 25/35 (71%), Gaps = 2/35 (5%)
 Frame = +3

Query: 3   LMCSFQILKPADKRK--CDSGLNMGRPNTPPRAQP 101
           LMCSFQILKP++K+     SG+N  RP TP R+ P
Sbjct: 419 LMCSFQILKPSEKKAKYLYSGMNSSRPTTPQRSAP 453


>AJ249214-1|CAB59732.1|  330|Drosophila melanogaster type 1
           serine/threonine proteinphosphatase protein.
          Length = 330

 Score = 43.2 bits (97), Expect = 5e-04
 Identities = 20/35 (57%), Positives = 25/35 (71%), Gaps = 2/35 (5%)
 Frame = +3

Query: 3   LMCSFQILKPADKRK--CDSGLNMGRPNTPPRAQP 101
           LMCSFQILKP++K+     SG+N  RP TP R+ P
Sbjct: 288 LMCSFQILKPSEKKAKYLYSGMNSSRPTTPQRSAP 322


>AE014298-1450|AAF46583.2|  330|Drosophila melanogaster CG2096-PB,
           isoform B protein.
          Length = 330

 Score = 43.2 bits (97), Expect = 5e-04
 Identities = 20/35 (57%), Positives = 25/35 (71%), Gaps = 2/35 (5%)
 Frame = +3

Query: 3   LMCSFQILKPADKRK--CDSGLNMGRPNTPPRAQP 101
           LMCSFQILKP++K+     SG+N  RP TP R+ P
Sbjct: 288 LMCSFQILKPSEKKAKYLYSGMNSSRPTTPQRSAP 322


>AE014298-1449|AAF46582.2|  461|Drosophila melanogaster CG2096-PA,
           isoform A protein.
          Length = 461

 Score = 43.2 bits (97), Expect = 5e-04
 Identities = 20/35 (57%), Positives = 25/35 (71%), Gaps = 2/35 (5%)
 Frame = +3

Query: 3   LMCSFQILKPADKRK--CDSGLNMGRPNTPPRAQP 101
           LMCSFQILKP++K+     SG+N  RP TP R+ P
Sbjct: 419 LMCSFQILKPSEKKAKYLYSGMNSSRPTTPQRSAP 453


>X15583-1|CAA33609.1|  302|Drosophila melanogaster protein (
           Fruitfly mRNA for proteinphosphatase 1 alpha. ).
          Length = 302

 Score = 35.5 bits (78), Expect = 0.11
 Identities = 15/15 (100%), Positives = 15/15 (100%)
 Frame = +3

Query: 3   LMCSFQILKPADKRK 47
           LMCSFQILKPADKRK
Sbjct: 287 LMCSFQILKPADKRK 301


>S47852-1|AAB23957.1|  302|Drosophila melanogaster protein
           phosphatase 1 catalyticsubunit 87B protein.
          Length = 302

 Score = 35.5 bits (78), Expect = 0.11
 Identities = 15/15 (100%), Positives = 15/15 (100%)
 Frame = +3

Query: 3   LMCSFQILKPADKRK 47
           LMCSFQILKPADKRK
Sbjct: 287 LMCSFQILKPADKRK 301


>AY061063-1|AAL28611.1|  302|Drosophila melanogaster LD03380p
           protein.
          Length = 302

 Score = 35.5 bits (78), Expect = 0.11
 Identities = 15/15 (100%), Positives = 15/15 (100%)
 Frame = +3

Query: 3   LMCSFQILKPADKRK 47
           LMCSFQILKPADKRK
Sbjct: 287 LMCSFQILKPADKRK 301


>AE014297-1518|AAF54810.1|  302|Drosophila melanogaster CG5650-PA
           protein.
          Length = 302

 Score = 35.5 bits (78), Expect = 0.11
 Identities = 15/15 (100%), Positives = 15/15 (100%)
 Frame = +3

Query: 3   LMCSFQILKPADKRK 47
           LMCSFQILKPADKRK
Sbjct: 287 LMCSFQILKPADKRK 301


>X69974-1|CAA49594.1|  302|Drosophila melanogaster serine /threonine
           specific proteinphosphatase protein.
          Length = 302

 Score = 32.3 bits (70), Expect = 0.98
 Identities = 13/15 (86%), Positives = 14/15 (93%)
 Frame = +3

Query: 3   LMCSFQILKPADKRK 47
           LMCSFQILKP +KRK
Sbjct: 287 LMCSFQILKPVEKRK 301


>AY060272-1|AAL25311.1|  302|Drosophila melanogaster GH10637p
           protein.
          Length = 302

 Score = 32.3 bits (70), Expect = 0.98
 Identities = 13/15 (86%), Positives = 14/15 (93%)
 Frame = +3

Query: 3   LMCSFQILKPADKRK 47
           LMCSFQILKP +KRK
Sbjct: 287 LMCSFQILKPVEKRK 301


>AE014298-2139|AAF48448.1|  302|Drosophila melanogaster CG9156-PA
           protein.
          Length = 302

 Score = 32.3 bits (70), Expect = 0.98
 Identities = 13/15 (86%), Positives = 14/15 (93%)
 Frame = +3

Query: 3   LMCSFQILKPADKRK 47
           LMCSFQILKP +KRK
Sbjct: 287 LMCSFQILKPVEKRK 301


>AE014297-3729|AAF56407.3|  828|Drosophila melanogaster CG11848-PA
           protein.
          Length = 828

 Score = 29.9 bits (64), Expect = 5.2
 Identities = 14/53 (26%), Positives = 24/53 (45%)
 Frame = +2

Query: 32  GRQAQV*LGPQHGPPQHAAARTAQEQEELMAPHARRPPTHAWTPLPHRCTLKI 190
           G QA++ LGP +    H      Q Q   + PH  +  T  W P+  + + ++
Sbjct: 575 GIQARIELGP-YNSHTHTIGFFRQNQARFLPPHVAKSSTWLWLPISQKNSAEV 626


>AE014297-2422|AAF55479.3| 2938|Drosophila melanogaster CG33547-PA
           protein.
          Length = 2938

 Score = 29.1 bits (62), Expect = 9.1
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +2

Query: 59  PQHGPPQHAAARTAQEQEELMAPHARRP 142
           PQH P  H+  + +Q Q++ + P   RP
Sbjct: 287 PQHTPQSHSQQQQSQHQQQHLMPQQHRP 314


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,396,750
Number of Sequences: 53049
Number of extensions: 691185
Number of successful extensions: 2202
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2019
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2185
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4607820675
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)