Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0378.Seq
         (934 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U00063-9|AAK18957.1|  333|Caenorhabditis elegans Yeast glc seven...    44   1e-04
Z73974-3|CAA98273.1|  329|Caenorhabditis elegans Hypothetical pr...    34   0.13 

>U00063-9|AAK18957.1|  333|Caenorhabditis elegans Yeast glc
           seven-like phosphatasesprotein 2 protein.
          Length = 333

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 22/36 (61%), Positives = 24/36 (66%), Gaps = 3/36 (8%)
 Frame = +3

Query: 3   LMCSFQILKPADKRKCD---SGLNMGRPNTPPRAQP 101
           LMCSFQILKPADK+K      G+   RP TPPR  P
Sbjct: 288 LMCSFQILKPADKKKYPYGAGGVGSNRPVTPPRNAP 323


>Z73974-3|CAA98273.1|  329|Caenorhabditis elegans Hypothetical
           protein F29F11.6 protein.
          Length = 329

 Score = 34.3 bits (75), Expect = 0.13
 Identities = 17/27 (62%), Positives = 21/27 (77%), Gaps = 2/27 (7%)
 Frame = +3

Query: 3   LMCSFQILKPADKR-KCD-SGLNMGRP 77
           LMCSFQILKP++K+ K    G+N GRP
Sbjct: 289 LMCSFQILKPSEKKAKYQYQGMNSGRP 315


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,773,263
Number of Sequences: 27780
Number of extensions: 331997
Number of successful extensions: 750
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 708
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 746
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2402214122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)