Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0377.Seq
         (879 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC005342-1|AAH05342.1|  282|Homo sapiens nucleosomal binding pro...    32   2.4  
AL391294-4|CAI39707.1|  161|Homo sapiens nucleosomal binding pro...    32   2.4  
AL391294-3|CAI39710.1|  201|Homo sapiens nucleosomal binding pro...    32   2.4  
AL391294-2|CAI39709.1|  148|Homo sapiens nucleosomal binding pro...    32   2.4  
AL391294-1|CAI39708.1|  282|Homo sapiens nucleosomal binding pro...    32   2.4  
AF250330-1|AAK14063.1|  282|Homo sapiens nucleosomal binding pro...    32   2.4  
AF250329-1|AAK14062.1|  282|Homo sapiens nucleosomal binding pro...    32   2.4  
AK094058-1|BAC04274.1|  225|Homo sapiens protein ( Homo sapiens ...    31   7.3  

>BC005342-1|AAH05342.1|  282|Homo sapiens nucleosomal binding
           protein 1 protein.
          Length = 282

 Score = 32.3 bits (70), Expect = 2.4
 Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
 Frame = -1

Query: 180 GKAKVVEDPETESVEAEVDEKNI--VSEKKTKRGRKAAGDTNGQDENGKIEE 31
           G+AK+ E P +E    EV E+NI   +EK  ++    A +   ++E+ K +E
Sbjct: 83  GEAKITEAPASEKEIVEVKEENIEDATEKGGEKKEAVAAEVKNEEEDQKEDE 134


>AL391294-4|CAI39707.1|  161|Homo sapiens nucleosomal binding
           protein 1 protein.
          Length = 161

 Score = 32.3 bits (70), Expect = 2.4
 Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
 Frame = -1

Query: 180 GKAKVVEDPETESVEAEVDEKNI--VSEKKTKRGRKAAGDTNGQDENGKIEE 31
           G+AK+ E P +E    EV E+NI   +EK  ++    A +   ++E+ K +E
Sbjct: 73  GEAKITEAPASEKEIVEVKEENIEDATEKGGEKKEAVAAEVKNEEEDQKEDE 124


>AL391294-3|CAI39710.1|  201|Homo sapiens nucleosomal binding
           protein 1 protein.
          Length = 201

 Score = 32.3 bits (70), Expect = 2.4
 Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
 Frame = -1

Query: 180 GKAKVVEDPETESVEAEVDEKNI--VSEKKTKRGRKAAGDTNGQDENGKIEE 31
           G+AK+ E P +E    EV E+NI   +EK  ++    A +   ++E+ K +E
Sbjct: 63  GEAKITEAPASEKEIVEVKEENIEDATEKGGEKKEAVAAEVKNEEEDQKEDE 114


>AL391294-2|CAI39709.1|  148|Homo sapiens nucleosomal binding
           protein 1 protein.
          Length = 148

 Score = 32.3 bits (70), Expect = 2.4
 Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
 Frame = -1

Query: 180 GKAKVVEDPETESVEAEVDEKNI--VSEKKTKRGRKAAGDTNGQDENGKIEE 31
           G+AK+ E P +E    EV E+NI   +EK  ++    A +   ++E+ K +E
Sbjct: 83  GEAKITEAPASEKEIVEVKEENIEDATEKGGEKKEAVAAEVKNEEEDQKEDE 134


>AL391294-1|CAI39708.1|  282|Homo sapiens nucleosomal binding
           protein 1 protein.
          Length = 282

 Score = 32.3 bits (70), Expect = 2.4
 Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
 Frame = -1

Query: 180 GKAKVVEDPETESVEAEVDEKNI--VSEKKTKRGRKAAGDTNGQDENGKIEE 31
           G+AK+ E P +E    EV E+NI   +EK  ++    A +   ++E+ K +E
Sbjct: 83  GEAKITEAPASEKEIVEVKEENIEDATEKGGEKKEAVAAEVKNEEEDQKEDE 134


>AF250330-1|AAK14063.1|  282|Homo sapiens nucleosomal binding
           protein 1 protein.
          Length = 282

 Score = 32.3 bits (70), Expect = 2.4
 Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
 Frame = -1

Query: 180 GKAKVVEDPETESVEAEVDEKNI--VSEKKTKRGRKAAGDTNGQDENGKIEE 31
           G+AK+ E P +E    EV E+NI   +EK  ++    A +   ++E+ K +E
Sbjct: 83  GEAKITEAPASEKEIVEVKEENIEDATEKGGEKKEAVAAEVKNEEEDQKEDE 134


>AF250329-1|AAK14062.1|  282|Homo sapiens nucleosomal binding
           protein 1 protein.
          Length = 282

 Score = 32.3 bits (70), Expect = 2.4
 Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
 Frame = -1

Query: 180 GKAKVVEDPETESVEAEVDEKNI--VSEKKTKRGRKAAGDTNGQDENGKIEE 31
           G+AK+ E P +E    EV E+NI   +EK  ++    A +   ++E+ K +E
Sbjct: 83  GEAKITEAPASEKEIVEVKEENIEDATEKGGEKKEAVAAEVKNEEEDQKEDE 134


>AK094058-1|BAC04274.1|  225|Homo sapiens protein ( Homo sapiens
           cDNA FLJ36739 fis, clone UTERU2013262, weakly similar to
           AXONEME-ASSOCIATED PROTEIN MST101(2). ).
          Length = 225

 Score = 30.7 bits (66), Expect = 7.3
 Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
 Frame = -1

Query: 180 GKAKVVEDPETESVEAEVDEKNI--VSEKKTKRGRKAAGDTNGQDENGK 40
           G+AK+ E P +E    EV E+NI   +EK  ++    A +   ++E+ K
Sbjct: 83  GEAKITEAPASEKEIVEVKEENIEDATEKGGEKKEAVAAEVKNEEEDQK 131


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,491,928
Number of Sequences: 237096
Number of extensions: 1014100
Number of successful extensions: 2112
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2054
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2103
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11215125244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)