Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0377.Seq
         (879 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U28739-11|AAR25657.1|  487|Caenorhabditis elegans Hypothetical p...    31   1.1  
U28739-10|AAR25656.1|  683|Caenorhabditis elegans Hypothetical p...    31   1.1  
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr...    30   2.5  
Z81586-11|CAF31485.1| 1165|Caenorhabditis elegans Hypothetical p...    29   4.4  
Z70284-14|CAA94285.4|  422|Caenorhabditis elegans Hypothetical p...    29   5.8  
Z93389-5|CAI79177.1|  212|Caenorhabditis elegans Hypothetical pr...    28   7.7  
Z81113-2|CAB03279.1|  510|Caenorhabditis elegans Hypothetical pr...    28   7.7  

>U28739-11|AAR25657.1|  487|Caenorhabditis elegans Hypothetical
           protein C17G10.6b protein.
          Length = 487

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = -1

Query: 162 EDPETESVEAEVDEKNIVSEKKTKRGRKAAGDTNGQDE 49
           ED E E  E E D ++  + +K K+GRK     N +DE
Sbjct: 346 EDYEDEDEEEEDDNEDDENSRKKKKGRKNGRKKNNEDE 383


>U28739-10|AAR25656.1|  683|Caenorhabditis elegans Hypothetical
           protein C17G10.6a protein.
          Length = 683

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = -1

Query: 162 EDPETESVEAEVDEKNIVSEKKTKRGRKAAGDTNGQDE 49
           ED E E  E E D ++  + +K K+GRK     N +DE
Sbjct: 397 EDYEDEDEEEEDDNEDDENSRKKKKGRKNGRKKNNEDE 434


>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical
           protein F36F2.3a protein.
          Length = 1128

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 14/56 (25%), Positives = 29/56 (51%)
 Frame = -1

Query: 207 DNDAPKKGRGKAKVVEDPETESVEAEVDEKNIVSEKKTKRGRKAAGDTNGQDENGK 40
           D D  +K +   K  ++ +++  + + DE ++ +EKK K+  +   D   +D N K
Sbjct: 787 DEDEERKRKKHKKHKKEKKSKKEKRDEDEDDLDTEKKEKKKERKYQDDKDEDSNRK 842


>Z81586-11|CAF31485.1| 1165|Caenorhabditis elegans Hypothetical
           protein T05F1.6 protein.
          Length = 1165

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
 Frame = -1

Query: 204 NDAPKKGRGKAKVVEDPETESV-EAEVDEKNIVSEKKTKRGRKAAGDTNGQDEN 46
           ND  K    + KVV D + E + + + D+++   +KKTK+    + D +  +++
Sbjct: 148 NDTEKPEENEEKVVGDEDEEDIDDVQEDDEDEAPKKKTKKAVSTSDDDDLHEDD 201


>Z70284-14|CAA94285.4|  422|Caenorhabditis elegans Hypothetical
           protein K07F5.14 protein.
          Length = 422

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
 Frame = -1

Query: 177 KAKVVEDPETESVEAEVDEKNIVS-EKKTKRGRKAAGDTNGQDENGKIEE 31
           K  V ED +    + E  EK   + EKKT R  K     + +DEN K EE
Sbjct: 49  KRIVFEDSDDGDDQDEETEKTAANGEKKTSRSSKRPKLFDSEDENDKDEE 98


>Z93389-5|CAI79177.1|  212|Caenorhabditis elegans Hypothetical
           protein T13F3.8 protein.
          Length = 212

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 17/58 (29%), Positives = 26/58 (44%)
 Frame = -1

Query: 204 NDAPKKGRGKAKVVEDPETESVEAEVDEKNIVSEKKTKRGRKAAGDTNGQDENGKIEE 31
           N AP++ + + KV + PE      + DE     EKK +  +K       + E  K EE
Sbjct: 62  NPAPEEKKKEEKVEKKPEENKEAEKKDEPKKEEEKKEEEKKKEEKKEEEKKEEVKEEE 119


>Z81113-2|CAB03279.1|  510|Caenorhabditis elegans Hypothetical
           protein T03F6.2 protein.
          Length = 510

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 29/104 (27%), Positives = 41/104 (39%), Gaps = 13/104 (12%)
 Frame = -1

Query: 294 YSNNEDKYIFLDHAPRSXXXXXXXXXXXADNDAPKKGRGKAKVVEDPETESVEAEV---- 127
           +   ED  IF +  P+             D    KKG G   + +  ETE+VEAE+    
Sbjct: 350 HMKEEDSTIFTEAEPKPDETPKGKKNKRKDR---KKGNG---IFDVEETEAVEAEIQEAP 403

Query: 126 ---------DEKNIVSEKKTKRGRKAAGDTNGQDENGKIEETAP 22
                    +EK    E   K  +K   D N Q+ +  +EE AP
Sbjct: 404 PVENEQPEEEEKECTPEVVKKEKKKRRADKN-QNPSATVEEEAP 446


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,026,972
Number of Sequences: 27780
Number of extensions: 176123
Number of successful extensions: 572
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 534
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 570
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)