Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0375.Seq
         (864 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M35889-1|AAA28448.1| 1589|Drosophila melanogaster defective chor...    29   6.2  
M35888-1|AAA28447.1|  950|Drosophila melanogaster defective chor...    29   6.2  
M35887-1|AAA28446.1| 1123|Drosophila melanogaster defective chor...    29   6.2  
AE014298-1067|AAN09216.1|  950|Drosophila melanogaster CG2175-PC...    29   6.2  
AE014298-1066|AAF46278.2| 1590|Drosophila melanogaster CG2175-PA...    29   6.2  
AE014298-1065|AAN09215.1| 1208|Drosophila melanogaster CG2175-PB...    29   6.2  

>M35889-1|AAA28448.1| 1589|Drosophila melanogaster defective
           chorion-1 fc177 proteinprecursor protein.
          Length = 1589

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 17/32 (53%), Positives = 20/32 (62%)
 Frame = -1

Query: 393 YRVSLLLIKIYTPLDLITRNKFEQALRDTRVR 298
           YR+S  L +  TP+  ITR   EQALRD  VR
Sbjct: 391 YRISYPLSR--TPIHKITRADIEQALRDDYVR 420


>M35888-1|AAA28447.1|  950|Drosophila melanogaster defective
           chorion-1 fc106 proteinprecursor protein.
          Length = 950

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 17/32 (53%), Positives = 20/32 (62%)
 Frame = -1

Query: 393 YRVSLLLIKIYTPLDLITRNKFEQALRDTRVR 298
           YR+S  L +  TP+  ITR   EQALRD  VR
Sbjct: 391 YRISYPLSR--TPIHKITRADIEQALRDDYVR 420


>M35887-1|AAA28446.1| 1123|Drosophila melanogaster defective
           chorion-1 fc125 proteinprecursor protein.
          Length = 1123

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 17/32 (53%), Positives = 20/32 (62%)
 Frame = -1

Query: 393 YRVSLLLIKIYTPLDLITRNKFEQALRDTRVR 298
           YR+S  L +  TP+  ITR   EQALRD  VR
Sbjct: 391 YRISYPLSR--TPIHKITRADIEQALRDDYVR 420


>AE014298-1067|AAN09216.1|  950|Drosophila melanogaster CG2175-PC,
           isoform C protein.
          Length = 950

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 17/32 (53%), Positives = 20/32 (62%)
 Frame = -1

Query: 393 YRVSLLLIKIYTPLDLITRNKFEQALRDTRVR 298
           YR+S  L +  TP+  ITR   EQALRD  VR
Sbjct: 391 YRISYPLSR--TPIHKITRADIEQALRDDYVR 420


>AE014298-1066|AAF46278.2| 1590|Drosophila melanogaster CG2175-PA,
           isoform A protein.
          Length = 1590

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 17/32 (53%), Positives = 20/32 (62%)
 Frame = -1

Query: 393 YRVSLLLIKIYTPLDLITRNKFEQALRDTRVR 298
           YR+S  L +  TP+  ITR   EQALRD  VR
Sbjct: 391 YRISYPLSR--TPIHKITRADIEQALRDDYVR 420


>AE014298-1065|AAN09215.1| 1208|Drosophila melanogaster CG2175-PB,
           isoform B protein.
          Length = 1208

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 17/32 (53%), Positives = 20/32 (62%)
 Frame = -1

Query: 393 YRVSLLLIKIYTPLDLITRNKFEQALRDTRVR 298
           YR+S  L +  TP+  ITR   EQALRD  VR
Sbjct: 391 YRISYPLSR--TPIHKITRADIEQALRDDYVR 420


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,822,866
Number of Sequences: 53049
Number of extensions: 656734
Number of successful extensions: 1410
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1342
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1410
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4168047156
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)