Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0374.Seq
         (555 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q01A03 Cluster: Kelch repeat:Kelch; n=3; Ostreococcus|R...    36   0.63 
UniRef50_UPI000051AD14 Cluster: PREDICTED: similar to CG7134-PA ...    32   7.8  

>UniRef50_Q01A03 Cluster: Kelch repeat:Kelch; n=3; Ostreococcus|Rep:
           Kelch repeat:Kelch - Ostreococcus tauri
          Length = 1055

 Score = 35.9 bits (79), Expect = 0.63
 Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
 Frame = -3

Query: 340 CFAESTTGSESRPTEKTRRETQWAVSMEYSLFVVIEEFDR-VGLFRLIGRFQVGKNNVID 164
           CF ++ TG  + PT++ R E + A S   S   ++   D+ +GLF  +G+F   K +  D
Sbjct: 279 CFGKNRTGRTAPPTKRKRGEPKEAPSAVASARALLSSRDQGLGLFHALGKFLYNKRDTHD 338

Query: 163 FV 158
            +
Sbjct: 339 LM 340


>UniRef50_UPI000051AD14 Cluster: PREDICTED: similar to CG7134-PA
           isoform 1, partial; n=1; Apis mellifera|Rep: PREDICTED:
           similar to CG7134-PA isoform 1, partial - Apis mellifera
          Length = 574

 Score = 32.3 bits (70), Expect = 7.8
 Identities = 13/44 (29%), Positives = 26/44 (59%)
 Frame = +2

Query: 128 IIICLSKFVCNEIYHVIFADLKTSD*PEKTDSIEFFDYDEERIF 259
           +++C S+F+ + +Y   F  LKT   P+ T +  +F  D+E ++
Sbjct: 7   LLLCASEFIKDRLY---FVTLKTMTKPKSTPNTHYFSIDDELVY 47


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 462,893,258
Number of Sequences: 1657284
Number of extensions: 7746011
Number of successful extensions: 15098
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 14702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15079
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 36655321736
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)