Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0374.Seq
         (555 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014135-58|AAS64606.2|  283|Drosophila melanogaster CG2381-PF, ...    29   5.6  
AE014135-57|AAF59353.3|  416|Drosophila melanogaster CG2381-PG, ...    29   5.6  
AE014135-56|AAN06525.3|  416|Drosophila melanogaster CG2381-PE, ...    29   5.6  
AE014135-55|AAN06524.3|  416|Drosophila melanogaster CG2381-PC, ...    29   5.6  
AE014135-54|AAF59354.4|  416|Drosophila melanogaster CG2381-PA, ...    29   5.6  

>AE014135-58|AAS64606.2|  283|Drosophila melanogaster CG2381-PF,
           isoform F protein.
          Length = 283

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = -3

Query: 274 WAVSMEYSLFVVIEEFDRVGLFRLIGRFQV-GKN 176
           W    E SL V++ +FD +G   LIGR  + GKN
Sbjct: 220 WEKIRECSLDVMVMDFDNIGRNELIGRILLAGKN 253


>AE014135-57|AAF59353.3|  416|Drosophila melanogaster CG2381-PG,
           isoform G protein.
          Length = 416

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = -3

Query: 274 WAVSMEYSLFVVIEEFDRVGLFRLIGRFQV-GKN 176
           W    E SL V++ +FD +G   LIGR  + GKN
Sbjct: 353 WEKIRECSLDVMVMDFDNIGRNELIGRILLAGKN 386


>AE014135-56|AAN06525.3|  416|Drosophila melanogaster CG2381-PE,
           isoform E protein.
          Length = 416

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = -3

Query: 274 WAVSMEYSLFVVIEEFDRVGLFRLIGRFQV-GKN 176
           W    E SL V++ +FD +G   LIGR  + GKN
Sbjct: 353 WEKIRECSLDVMVMDFDNIGRNELIGRILLAGKN 386


>AE014135-55|AAN06524.3|  416|Drosophila melanogaster CG2381-PC,
           isoform C protein.
          Length = 416

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = -3

Query: 274 WAVSMEYSLFVVIEEFDRVGLFRLIGRFQV-GKN 176
           W    E SL V++ +FD +G   LIGR  + GKN
Sbjct: 353 WEKIRECSLDVMVMDFDNIGRNELIGRILLAGKN 386


>AE014135-54|AAF59354.4|  416|Drosophila melanogaster CG2381-PA,
           isoform A protein.
          Length = 416

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = -3

Query: 274 WAVSMEYSLFVVIEEFDRVGLFRLIGRFQV-GKN 176
           W    E SL V++ +FD +G   LIGR  + GKN
Sbjct: 353 WEKIRECSLDVMVMDFDNIGRNELIGRILLAGKN 386


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,086,684
Number of Sequences: 53049
Number of extensions: 333785
Number of successful extensions: 604
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 598
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 602
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2131214097
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)