Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0373.Seq
(876 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF468474-1|ABR25244.1| 516|Tribolium castaneum methoprene-toler... 25 1.0
AY884063-1|AAX84204.1| 682|Tribolium castaneum pro-phenol oxida... 24 1.4
DQ855503-1|ABH88190.1| 124|Tribolium castaneum chemosensory pro... 23 2.4
EF222293-1|ABN79653.1| 434|Tribolium castaneum ecdysis triggeri... 23 3.1
DQ855502-1|ABH88189.1| 126|Tribolium castaneum chemosensory pro... 23 4.2
DQ855501-1|ABH88188.1| 146|Tribolium castaneum chemosensory pro... 23 4.2
DQ855495-1|ABH88182.1| 126|Tribolium castaneum chemosensory pro... 23 4.2
EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D pro... 22 5.5
DQ855497-1|ABH88184.1| 127|Tribolium castaneum chemosensory pro... 22 5.5
DQ414247-1|ABD63009.2| 414|Tribolium castaneum paired protein. 22 7.3
DQ855489-1|ABH88176.1| 122|Tribolium castaneum chemosensory pro... 21 9.6
AJ973444-1|CAJ01491.1| 122|Tribolium castaneum hypothetical pro... 21 9.6
>EF468474-1|ABR25244.1| 516|Tribolium castaneum methoprene-tolerant
protein.
Length = 516
Score = 24.6 bits (51), Expect = 1.0
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -1
Query: 726 PVLGPMRSAKSYPXFIKINDFGREAXPSI 640
P L PM S YP +I + ++ PSI
Sbjct: 477 PQLSPMSSLPPYPNRTQITEVTQQTEPSI 505
>AY884063-1|AAX84204.1| 682|Tribolium castaneum pro-phenol oxidase
subunit 1 protein.
Length = 682
Score = 24.2 bits (50), Expect = 1.4
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +3
Query: 537 SYSVTWDNCGNSRANTC 587
+Y +T +N GN+R TC
Sbjct: 483 TYKITVNNSGNNRMGTC 499
>DQ855503-1|ABH88190.1| 124|Tribolium castaneum chemosensory
protein 17 protein.
Length = 124
Score = 23.4 bits (48), Expect = 2.4
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +3
Query: 255 KNFLVCTLQKNKC 293
KN+L C L+K KC
Sbjct: 40 KNYLDCILEKGKC 52
>EF222293-1|ABN79653.1| 434|Tribolium castaneum ecdysis triggering
hormone receptorisoform A protein.
Length = 434
Score = 23.0 bits (47), Expect = 3.1
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 519 QFWFLRSYSVTWDNCGNS-RANTCNQNSDQ*WDECF 623
+F+F R+ + T+ NS R++T N D+ ++ CF
Sbjct: 371 KFYFKRARNGTFSTTANSCRSSTFRNNRDE-YNVCF 405
>DQ855502-1|ABH88189.1| 126|Tribolium castaneum chemosensory
protein 16 protein.
Length = 126
Score = 22.6 bits (46), Expect = 4.2
Identities = 11/47 (23%), Positives = 20/47 (42%)
Frame = -1
Query: 300 LECICFSGECTRESSSINNNHHLTWLIITS*CVHSSL*NVERLLHHL 160
L+C+ G+CT E + + + C V +++HHL
Sbjct: 44 LDCVLGKGKCTPEGEELKKDIPEALQNGCAKCNEKHKEGVRKVIHHL 90
>DQ855501-1|ABH88188.1| 146|Tribolium castaneum chemosensory
protein 15 protein.
Length = 146
Score = 22.6 bits (46), Expect = 4.2
Identities = 11/47 (23%), Positives = 20/47 (42%)
Frame = -1
Query: 300 LECICFSGECTRESSSINNNHHLTWLIITS*CVHSSL*NVERLLHHL 160
L+C+ G+CT+E+ + T C +V ++ HL
Sbjct: 42 LDCVLDKGKCTKEAEKLKKGITETMKNGCVKCEQKQKEDVHKVFQHL 88
Score = 21.8 bits (44), Expect = 7.3
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +3
Query: 255 KNFLVCTLQKNKC 293
+N+L C L K KC
Sbjct: 39 RNYLDCVLDKGKC 51
>DQ855495-1|ABH88182.1| 126|Tribolium castaneum chemosensory
protein 9 protein.
Length = 126
Score = 22.6 bits (46), Expect = 4.2
Identities = 11/47 (23%), Positives = 20/47 (42%)
Frame = -1
Query: 300 LECICFSGECTRESSSINNNHHLTWLIITS*CVHSSL*NVERLLHHL 160
L+C+ G+CT E + + + C V +++HHL
Sbjct: 44 LDCVLGKGKCTPEGEELKKDIPEALQNGCAKCNEKHKEGVRKVIHHL 90
>EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D
protein.
Length = 255
Score = 22.2 bits (45), Expect = 5.5
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -2
Query: 779 QKLPSEV**GRHLERCLRRYLDPCDLPKVIP 687
Q+ P+ + R RC+ + CD+P IP
Sbjct: 184 QRCPAMLVFDRRSLRCVVPPTEDCDVPSTIP 214
>DQ855497-1|ABH88184.1| 127|Tribolium castaneum chemosensory
protein 11 protein.
Length = 127
Score = 22.2 bits (45), Expect = 5.5
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +3
Query: 255 KNFLVCTLQKNKC 293
KN++ C L+K KC
Sbjct: 44 KNYVNCLLEKGKC 56
>DQ414247-1|ABD63009.2| 414|Tribolium castaneum paired protein.
Length = 414
Score = 21.8 bits (44), Expect = 7.3
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +2
Query: 422 GXGPVVICLSQRLSHACLS 478
G P VI R+SH C+S
Sbjct: 70 GIRPCVISRQLRVSHGCVS 88
>DQ855489-1|ABH88176.1| 122|Tribolium castaneum chemosensory
protein 2 protein.
Length = 122
Score = 21.4 bits (43), Expect = 9.6
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +3
Query: 258 NFLVCTLQKNKC 293
N+L C L+K KC
Sbjct: 42 NYLQCLLKKGKC 53
>AJ973444-1|CAJ01491.1| 122|Tribolium castaneum hypothetical
protein protein.
Length = 122
Score = 21.4 bits (43), Expect = 9.6
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +3
Query: 258 NFLVCTLQKNKC 293
N+L C L+K KC
Sbjct: 42 NYLQCLLKKGKC 53
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,340
Number of Sequences: 336
Number of extensions: 4888
Number of successful extensions: 20
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24203322
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -