Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0373.Seq
         (876 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z46894-1|CAA86996.1|  357|Drosophila melanogaster FKBP39 protein.      43   5e-04
AY094814-1|AAM11167.1|  357|Drosophila melanogaster LD30817p pro...    43   5e-04
AE014297-2012|AAF55171.2|  357|Drosophila melanogaster CG6226-PA...    43   5e-04

>Z46894-1|CAA86996.1|  357|Drosophila melanogaster FKBP39 protein.
          Length = 357

 Score = 43.2 bits (97), Expect = 5e-04
 Identities = 16/31 (51%), Positives = 24/31 (77%)
 Frame = +1

Query: 112 INMFWGLIMEPNKRYTQVVEKPFHISQAAMD 204
           ++MFWGL M+P ++Y+Q + K FHIS  A+D
Sbjct: 1   MSMFWGLNMKPERKYSQTIIKSFHISGVALD 31


>AY094814-1|AAM11167.1|  357|Drosophila melanogaster LD30817p
           protein.
          Length = 357

 Score = 43.2 bits (97), Expect = 5e-04
 Identities = 16/31 (51%), Positives = 24/31 (77%)
 Frame = +1

Query: 112 INMFWGLIMEPNKRYTQVVEKPFHISQAAMD 204
           ++MFWGL M+P ++Y+Q + K FHIS  A+D
Sbjct: 1   MSMFWGLNMKPERKYSQTIIKSFHISGVALD 31


>AE014297-2012|AAF55171.2|  357|Drosophila melanogaster CG6226-PA
           protein.
          Length = 357

 Score = 43.2 bits (97), Expect = 5e-04
 Identities = 16/31 (51%), Positives = 24/31 (77%)
 Frame = +1

Query: 112 INMFWGLIMEPNKRYTQVVEKPFHISQAAMD 204
           ++MFWGL M+P ++Y+Q + K FHIS  A+D
Sbjct: 1   MSMFWGLNMKPERKYSQTIIKSFHISGVALD 31


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,933,955
Number of Sequences: 53049
Number of extensions: 921849
Number of successful extensions: 2213
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2211
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4250176164
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)