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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0368.Seq
         (899 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase Abc...    45   2e-05
SPAC15A10.01 |atm1|SPAC8C9.18|ABC family iron transporter Atm1|S...    42   1e-04
SPAC20G4.01 ||SPAC22F8.13|CCR4-Not complex subunit Caf16|Schizos...    41   3e-04
SPCC417.08 |tef3||translation elongation factor eEF3|Schizosacch...    41   3e-04
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch...    40   5e-04
SPBC9B6.09c |mdl1||mitochondrial peptide-transporting ATPase|Sch...    40   6e-04
SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces pombe...    39   0.001
SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family |Schizosa...    39   0.001
SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1 |Schizo...    39   0.001
SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase Abc4|...    38   0.002
SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar ...    38   0.002
SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces pom...    38   0.003
SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces ...    36   0.010
SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces po...    35   0.014
SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transpo...    31   0.17 
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual        31   0.29 
SPCC16C4.14c |sfc4||transcription factor TFIIIC complex subunit ...    30   0.52 
SPAC323.04 |||mitochondrial ATPase |Schizosaccharomyces pombe|ch...    28   1.6  
SPAPB24D3.09c |pdr1||ABC transporter Pdr1|Schizosaccharomyces po...    28   2.1  
SPAC4H3.02c |||sequence orphan|Schizosaccharomyces pombe|chr 1||...    27   3.6  
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc...    26   6.3  
SPAC222.05c |mss1||COX RNA-associated protein|Schizosaccharomyce...    26   6.3  
SPBC1711.12 |||serine peptidase |Schizosaccharomyces pombe|chr 2...    26   8.4  
SPAC20H4.07 |rhp57||RecA family ATPase Rhp57|Schizosaccharomyces...    26   8.4  
SPAC2F7.09c |||sequence orphan|Schizosaccharomyces pombe|chr 1||...    26   8.4  
SPAC821.06 |spn2||septin Spn2|Schizosaccharomyces pombe|chr 1|||...    26   8.4  

>SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase
            Abc2|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1463

 Score = 44.8 bits (101), Expect = 2e-05
 Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
 Frame = +1

Query: 337  SKHYAENI--VLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGLETPTAGDV 489
            S  Y EN+  VLN + ++I   + + +VGR+G GKSTL   L  L  PT+GD+
Sbjct: 1230 SVRYRENLPLVLNDISVNIKPQEKIGIVGRTGAGKSTLTLALFRLIEPTSGDI 1282



 Score = 27.1 bits (57), Expect = 3.6
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = +1

Query: 364 LNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGLETPTAGDV 489
           L  +D     G+   +VG+ G GKS+LL    G     +G V
Sbjct: 599 LRDIDFVARRGELCCIVGKVGMGKSSLLEACLGNMQKHSGSV 640


>SPAC15A10.01 |atm1|SPAC8C9.18|ABC family iron transporter
           Atm1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 693

 Score = 41.9 bits (94), Expect = 1e-04
 Identities = 22/44 (50%), Positives = 27/44 (61%)
 Frame = +1

Query: 361 VLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGLETPTAGDVL 492
           +LN    +IPAG  VA VG SG GKST+LRLL       +G +L
Sbjct: 458 ILNGCSFNIPAGAKVAFVGASGCGKSTILRLLFRFYDTDSGKIL 501


>SPAC20G4.01 ||SPAC22F8.13|CCR4-Not complex subunit
           Caf16|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 280

 Score = 40.7 bits (91), Expect = 3e-04
 Identities = 19/45 (42%), Positives = 27/45 (60%)
 Frame = +1

Query: 364 LNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGLETPTAGDVLAG 498
           L+ + L +P G    +VG +G GKSTLL+LL+G     AG +  G
Sbjct: 20  LDHVTLDLPKGSRTLLVGANGAGKSTLLKLLSGKSLAKAGHISVG 64


>SPCC417.08 |tef3||translation elongation factor
           eEF3|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 1047

 Score = 40.7 bits (91), Expect = 3e-04
 Identities = 17/52 (32%), Positives = 29/52 (55%)
 Frame = +1

Query: 364 LNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGLETPTAGDVLAGTTPRLKF 519
           LN +   +     +AV+G +G GKSTL+++L G   PT G++      R+ +
Sbjct: 690 LNDISFQVSLSSRIAVIGPNGAGKSTLIKVLTGELLPTVGEIYQHENCRIAY 741



 Score = 32.3 bits (70), Expect = 0.097
 Identities = 17/50 (34%), Positives = 26/50 (52%)
 Frame = +1

Query: 307 QGTPLLLNAVSKHYAENIVLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLL 456
           +G  L     S  Y   I+LN+  L +  G+   + G +G GKSTL+R +
Sbjct: 431 EGEDLCNCEFSLAYGAKILLNRTRLRLKRGRRYGLCGPNGSGKSTLMRAI 480


>SPCC663.03 |pmd1||leptomycin efflux transporter
           Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 1362

 Score = 39.9 bits (89), Expect = 5e-04
 Identities = 19/46 (41%), Positives = 27/46 (58%)
 Frame = +1

Query: 352 ENIVLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGLETPTAGDV 489
           E +VL+   L  P+G+  A+VG SG GKST++ L+     P  G V
Sbjct: 434 EVLVLDNFSLVCPSGKITALVGASGSGKSTIIGLVERFYDPIGGQV 479



 Score = 35.9 bits (79), Expect = 0.008
 Identities = 18/32 (56%), Positives = 22/32 (68%)
 Frame = +1

Query: 361  VLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLL 456
            VL  L+L +  GQFVA VG SG GKST + L+
Sbjct: 1136 VLRGLNLTVKPGQFVAFVGSSGCGKSTTIGLI 1167


>SPBC9B6.09c |mdl1||mitochondrial peptide-transporting
           ATPase|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 726

 Score = 39.5 bits (88), Expect = 6e-04
 Identities = 19/45 (42%), Positives = 27/45 (60%)
 Frame = +1

Query: 361 VLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGLETPTAGDVLA 495
           + + L   I  G  VA+V  SGGGKST+ +LL     P++G +LA
Sbjct: 499 IFDNLSFDIHPGTNVAIVAPSGGGKSTISQLLLRFYAPSSGKILA 543


>SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces pombe|chr
            2|||Manual
          Length = 1465

 Score = 38.7 bits (86), Expect = 0.001
 Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
 Frame = +1

Query: 328  NAVSKHYAENI--VLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGLETPTAGDV 489
            N  S  Y E++   LN +++ I   + + +VGR+G GKSTL   L  +  PT G +
Sbjct: 1229 NHYSAKYREDLSFALNNINIEISPREKIGIVGRTGAGKSTLAMALFRIIEPTEGKI 1284


>SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 618

 Score = 38.7 bits (86), Expect = 0.001
 Identities = 19/46 (41%), Positives = 27/46 (58%)
 Frame = +1

Query: 352 ENIVLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGLETPTAGDV 489
           ++ +   L   I     VA+VG++G GKSTLL L+ GL  P  G+V
Sbjct: 402 DHALYRDLSFGIDMDSRVAIVGKNGTGKSTLLNLITGLLIPIEGNV 447


>SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1336

 Score = 38.7 bits (86), Expect = 0.001
 Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
 Frame = +1

Query: 352 ENIV-LNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGLETPTAGDVLAGTTP 507
           EN+  L  + + IP G+ V ++G SG GKST + LL    +PT G++     P
Sbjct: 447 ENLFSLINVSVFIPFGELVHIIGPSGSGKSTFISLLLRYFSPTYGNIYLDDFP 499



 Score = 37.1 bits (82), Expect = 0.003
 Identities = 18/34 (52%), Positives = 24/34 (70%)
 Frame = +1

Query: 355  NIVLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLL 456
            ++ LN + L I A + VA+VG SG GKSTL+ LL
Sbjct: 1115 HLALNNVSLSIEAREKVAIVGISGSGKSTLVELL 1148


>SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase
            Abc4|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1469

 Score = 37.9 bits (84), Expect = 0.002
 Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
 Frame = +1

Query: 319  LLLNAVSKHY--AENIVLNQLDLHIPAGQFVAVVGRSGGGKSTL 444
            ++ N VS  Y  A   +L  ++LHI   + VAVVGR+G GKSTL
Sbjct: 1212 IVFNHVSVSYSAAGPTILKDVNLHINPSEKVAVVGRTGSGKSTL 1255



 Score = 28.7 bits (61), Expect = 1.2
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = +1

Query: 325 LNAVSKHYAENIVLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAG 462
           L  VS     +  L  L++  P  +   V+G +G GKS+L+  L G
Sbjct: 618 LTWVSNPSPGDFCLRDLNIVFPRNKLSIVIGPTGSGKSSLISALLG 663


>SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar
           membrane transporter Hmt1|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 830

 Score = 37.9 bits (84), Expect = 0.002
 Identities = 18/64 (28%), Positives = 34/64 (53%)
 Frame = +1

Query: 298 RLNQGTPLLLNAVSKHYAENIVLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGLETPT 477
           ++ QG  +  +    +     VL+ ++     G+ +A+VG SGGGKST++R+L       
Sbjct: 578 KVTQGKVIFSHVSFAYDPRKPVLSDINFVAQPGKVIALVGESGGGKSTIMRILLRFFDVN 637

Query: 478 AGDV 489
           +G +
Sbjct: 638 SGSI 641


>SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 736

 Score = 37.5 bits (83), Expect = 0.003
 Identities = 19/52 (36%), Positives = 30/52 (57%)
 Frame = +1

Query: 361 VLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGLETPTAGDVLAGTTPRLK 516
           +L  +D+ +     + VVG +G GKST+L+LL     PT+G  +    PRL+
Sbjct: 533 ILKHVDIDVQMDSRIGVVGPNGAGKSTMLKLLIEQLHPTSG--IVSRHPRLR 582



 Score = 31.9 bits (69), Expect = 0.13
 Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
 Frame = +1

Query: 304 NQGTP--LLLNAVSKHYAENIVLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGLE 468
           NQG    + ++ +   +A + +L    L +  G+   + GR+G GKSTLLR L+  E
Sbjct: 176 NQGKSKDIKIDGIDLAFAGHRILTGASLTLAQGRRYGLTGRNGIGKSTLLRALSRRE 232


>SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 1427

 Score = 35.5 bits (78), Expect = 0.010
 Identities = 22/53 (41%), Positives = 27/53 (50%)
 Frame = +1

Query: 364 LNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGLETPTAGDVLAGTTPRLKFR 522
           L  L+  IP  QF  VVG +G GKSTL   L G     +G +   TTP +  R
Sbjct: 597 LKNLNFTIPRNQFTLVVGSTGSGKSTLAMALLGELHVISGKM---TTPSISQR 646



 Score = 31.9 bits (69), Expect = 0.13
 Identities = 15/37 (40%), Positives = 23/37 (62%)
 Frame = +1

Query: 334  VSKHYAENIVLNQLDLHIPAGQFVAVVGRSGGGKSTL 444
            VS    +  VL  ++L I   + +A+VGR+G GKST+
Sbjct: 1187 VSYSIGQAAVLEDINLEILPKEKIAIVGRTGSGKSTM 1223


>SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 1057

 Score = 35.1 bits (77), Expect = 0.014
 Identities = 16/37 (43%), Positives = 23/37 (62%)
 Frame = +1

Query: 346 YAENIVLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLL 456
           Y   ++L+  +LH+  G    VVG +G GKSTLLR +
Sbjct: 454 YGGRLLLSHTNLHLYRGHRYGVVGHNGCGKSTLLRAI 490



 Score = 33.1 bits (72), Expect = 0.055
 Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
 Frame = +1

Query: 301 LNQGTPLLLNAVSKHY----AENIVLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGLE 468
           +   T L+L   +  Y    A+   L+ + + +     VA++G +G GKSTL+++L G  
Sbjct: 684 VRSNTRLILKMTNASYTYPNAKKKSLDNVTVGLSLSSRVAILGPNGAGKSTLIKVLIGEV 743

Query: 469 TPTAGDV 489
            P  G V
Sbjct: 744 IPQEGKV 750


>SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux
           transporter Bfr1|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 1530

 Score = 31.5 bits (68), Expect = 0.17
 Identities = 14/33 (42%), Positives = 22/33 (66%)
 Frame = +1

Query: 361 VLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLA 459
           +LN +   +  G+  A++G SG GK+TLL +LA
Sbjct: 900 LLNGVQGFVVPGKLTALMGESGAGKTTLLNVLA 932



 Score = 28.3 bits (60), Expect = 1.6
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +1

Query: 340 KHYAENIVLNQLDLHIPAGQFVAVVGRSGGGKSTLLR 450
           K   E  +L+       AG+ V V+G+ G G ST LR
Sbjct: 169 KQVVEKAILSHCHALANAGELVMVLGQPGSGCSTFLR 205


>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 4717

 Score = 30.7 bits (66), Expect = 0.29
 Identities = 14/35 (40%), Positives = 23/35 (65%)
 Frame = +1

Query: 361 VLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGL 465
           +L QL   +   + + +VG +G GK+T ++LLAGL
Sbjct: 456 LLEQLAAGVQTNEPLLLVGETGTGKTTTIQLLAGL 490


>SPCC16C4.14c |sfc4||transcription factor TFIIIC complex subunit
           Sfc4|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 1006

 Score = 29.9 bits (64), Expect = 0.52
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +3

Query: 21  AWCPALNYGRRAFCVGPD 74
           +W PA+NY  RAF + PD
Sbjct: 856 SWIPAINYYSRAFAINPD 873


>SPAC323.04 |||mitochondrial ATPase |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 487

 Score = 28.3 bits (60), Expect = 1.6
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = +1

Query: 406 AVVGRSGGGKSTLLRLLAGLETPT 477
           A++G +G G++T LR + G  TP+
Sbjct: 34  AIIGNTGSGRTTFLRCIQGSFTPS 57



 Score = 28.3 bits (60), Expect = 1.6
 Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = +1

Query: 310 GTPLL-LNAVSKHYAENIVLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAG 462
           G PL+ +  ++  Y    VL+ ++  I  G+  A+ G +G GK+TLL  + G
Sbjct: 261 GKPLISMEHLNCVYWGRKVLSDINWTIREGERWALTGSNGSGKTTLLAYVVG 312


>SPAPB24D3.09c |pdr1||ABC transporter Pdr1|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 1396

 Score = 27.9 bits (59), Expect = 2.1
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +1

Query: 376 DLHIPAGQFVAVVGRSGGGKSTLLRLLAGL 465
           D ++  G  + V+G  G G STLL+ L G+
Sbjct: 96  DGYLQPGSSLLVLGHEGSGGSTLLKALCGI 125



 Score = 25.8 bits (54), Expect = 8.4
 Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
 Frame = +1

Query: 361 VLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLA--GLETPTAGDV-LAGTTPRLKFRK 525
           +L  +  ++      A++G +  GKS LLR+L+  G+     G++ L+G       RK
Sbjct: 776 ILTNVSGYLKKNTLTALLGENKSGKSVLLRILSQRGIAGSVEGEITLSGLKNPKNLRK 833


>SPAC4H3.02c |||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 391

 Score = 27.1 bits (57), Expect = 3.6
 Identities = 14/47 (29%), Positives = 21/47 (44%)
 Frame = +3

Query: 285 YEYCSSEPGHAIVAQCSKQTLRGKYRPEPTGFTYSGRSVCGGGGPQR 425
           YE    EP   ++   S Q L+ +   +PT F    R   G G P++
Sbjct: 184 YEASPGEPVEPLITDASLQRLKSRANEDPTIFNILKRISKGLGTPEQ 230


>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 822

 Score = 26.2 bits (55), Expect = 6.3
 Identities = 15/45 (33%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
 Frame = +1

Query: 358 IVLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLA-GL-ETPTAGD 486
           +++   +L++  G+   ++  +G GKSTLL  +A GL  TP++ D
Sbjct: 289 LLIKDSELNLINGRRYGLIAPNGSGKSTLLHAIACGLIPTPSSLD 333


>SPAC222.05c |mss1||COX RNA-associated protein|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 496

 Score = 26.2 bits (55), Expect = 6.3
 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 9/44 (20%)
 Frame = +1

Query: 355 NIVLNQLDLHIPAGQF---------VAVVGRSGGGKSTLLRLLA 459
           N + +++D HI  G+          VA++G S  GKS+L+ LLA
Sbjct: 217 NEMKDEIDAHIEGGKCKEVLRKGINVAILGPSNAGKSSLINLLA 260


>SPBC1711.12 |||serine peptidase |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 683

 Score = 25.8 bits (54), Expect = 8.4
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -1

Query: 317 GVPWFRRAVFIPWPPSNDKPGPAQPE 240
           G PW  R ++  W PSN     A PE
Sbjct: 584 GTPWENRVIYERWNPSNFVNYWATPE 609


>SPAC20H4.07 |rhp57||RecA family ATPase Rhp57|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 354

 Score = 25.8 bits (54), Expect = 8.4
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +1

Query: 385 IPAGQFVAVVGRSGGGKS 438
           IP GQ   + G SG GKS
Sbjct: 90  IPVGQLTEICGESGSGKS 107


>SPAC2F7.09c |||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 491

 Score = 25.8 bits (54), Expect = 8.4
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = +1

Query: 403 VAVVGRSGGGKSTLLRLLA 459
           V VVG +  GKSTLL+ LA
Sbjct: 212 VYVVGEANSGKSTLLKTLA 230


>SPAC821.06 |spn2||septin Spn2|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 331

 Score = 25.8 bits (54), Expect = 8.4
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = +1

Query: 403 VAVVGRSGGGKSTLLRLL 456
           V VVG SG GKSTL+  L
Sbjct: 35  VMVVGPSGSGKSTLINTL 52


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,545,675
Number of Sequences: 5004
Number of extensions: 69249
Number of successful extensions: 217
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 217
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 454497130
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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