Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0368.Seq
(899 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_20094| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 3e-06
SB_39746| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_30636| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 1e-05
SB_25408| Best HMM Match : ABC_tran (HMM E-Value=0) 48 1e-05
SB_56043| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_39005| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 1e-04
SB_37973| Best HMM Match : ABC_tran (HMM E-Value=0) 43 3e-04
SB_36385| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_10268| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_59357| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 9e-04
SB_36388| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 9e-04
SB_30376| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_22546| Best HMM Match : ABC_tran (HMM E-Value=0) 41 0.002
SB_16306| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.002
SB_7365| Best HMM Match : ABC_membrane (HMM E-Value=0) 40 0.002
SB_40840| Best HMM Match : ABC-3 (HMM E-Value=2.4) 40 0.004
SB_33973| Best HMM Match : ABC_tran (HMM E-Value=0) 40 0.004
SB_52342| Best HMM Match : ABC_tran (HMM E-Value=5.29999e-41) 39 0.006
SB_44672| Best HMM Match : ABC_tran (HMM E-Value=4.2039e-44) 38 0.008
SB_14067| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_37511| Best HMM Match : ABC_tran (HMM E-Value=0) 38 0.015
SB_36627| Best HMM Match : ABC_tran (HMM E-Value=5.4e-06) 37 0.019
SB_27093| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.019
SB_40697| Best HMM Match : ABC_tran (HMM E-Value=7.1e-07) 36 0.045
SB_24381| Best HMM Match : MMR_HSR1 (HMM E-Value=2) 36 0.045
SB_1653| Best HMM Match : ABC_tran (HMM E-Value=0) 36 0.045
SB_26155| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.059
SB_32252| Best HMM Match : RVT_1 (HMM E-Value=9.2e-21) 35 0.078
SB_17925| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.10
SB_35286| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.10
SB_27355| Best HMM Match : ABC_tran (HMM E-Value=1.1e-37) 35 0.10
SB_33165| Best HMM Match : ABC_tran (HMM E-Value=0) 34 0.14
SB_30085| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.14
SB_12613| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.14
SB_58724| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.18
SB_45078| Best HMM Match : ABC_tran (HMM E-Value=2.6e-36) 33 0.24
SB_29759| Best HMM Match : ABC_tran (HMM E-Value=0) 33 0.24
SB_52656| Best HMM Match : ABC_tran (HMM E-Value=0) 33 0.31
SB_42212| Best HMM Match : ABC_tran (HMM E-Value=0) 33 0.31
SB_34187| Best HMM Match : ABC_tran (HMM E-Value=1.49995e-41) 33 0.31
SB_11108| Best HMM Match : ABC_tran (HMM E-Value=0) 33 0.31
SB_40653| Best HMM Match : ABC_tran (HMM E-Value=0) 33 0.42
SB_34083| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.55
SB_40695| Best HMM Match : ABC_tran (HMM E-Value=7.79963e-42) 32 0.73
SB_35301| Best HMM Match : ABC_tran (HMM E-Value=0) 32 0.73
SB_7501| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.73
SB_216| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.73
SB_37300| Best HMM Match : MMR_HSR1 (HMM E-Value=0.061) 31 0.96
SB_55554| Best HMM Match : AAA (HMM E-Value=0.022) 31 0.96
SB_8906| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.96
SB_31867| Best HMM Match : ABC_tran (HMM E-Value=1.3e-36) 31 1.3
SB_59051| Best HMM Match : ABC_tran (HMM E-Value=2.4e-41) 31 1.3
SB_20992| Best HMM Match : ABC_tran (HMM E-Value=1.3e-36) 31 1.3
SB_34997| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.7
SB_58013| Best HMM Match : ABC_membrane (HMM E-Value=6.3e-28) 31 1.7
SB_28063| Best HMM Match : ABC_tran (HMM E-Value=0) 31 1.7
SB_58705| Best HMM Match : ABC_tran (HMM E-Value=5.7e-05) 30 2.2
SB_6025| Best HMM Match : MMR_HSR1 (HMM E-Value=1.1e-17) 30 2.9
SB_24967| Best HMM Match : Drf_FH1 (HMM E-Value=0.65) 29 5.1
SB_43996| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_53823| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.8
SB_42790| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.8
SB_58335| Best HMM Match : SMC_N (HMM E-Value=0.023) 28 8.9
SB_55989| Best HMM Match : zf-C2H2 (HMM E-Value=8e-08) 28 8.9
SB_22559| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_20224| Best HMM Match : ABC_tran (HMM E-Value=2.2e-36) 28 8.9
SB_59333| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_11212| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
>SB_20094| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 374
Score = 50.0 bits (114), Expect = 3e-06
Identities = 23/46 (50%), Positives = 32/46 (69%)
Frame = +1
Query: 361 VLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGLETPTAGDVLAG 498
VL +L++ IPA + A+VG SG GK+TL++LL P+ GDVL G
Sbjct: 240 VLKELNMTIPAKKITAIVGTSGSGKTTLMKLLLKFYEPSEGDVLLG 285
>SB_39746| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 639
Score = 49.2 bits (112), Expect = 4e-06
Identities = 24/49 (48%), Positives = 30/49 (61%)
Frame = +1
Query: 361 VLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGLETPTAGDVLAGTTP 507
VL+ + + GQ VA+VG SGGGKST + LL L PT G+VL P
Sbjct: 369 VLDNVSFMVEPGQVVALVGPSGGGKSTCINLLEHLYEPTGGEVLIDAVP 417
>SB_30636| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 48.0 bits (109), Expect = 1e-05
Identities = 24/58 (41%), Positives = 32/58 (55%)
Frame = +1
Query: 325 LNAVSKHYAENIVLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGLETPTAGDVLAG 498
L + K Y N VL + L + G+ V ++G SG GKSTLLR + LE P G + G
Sbjct: 24 LKDLRKSYGSNEVLKGISLDVAPGEVVCLIGPSGSGKSTLLRCVNLLEQPNEGTIHVG 81
>SB_25408| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1636
Score = 47.6 bits (108), Expect = 1e-05
Identities = 23/69 (33%), Positives = 47/69 (68%), Gaps = 3/69 (4%)
Frame = +1
Query: 295 ARLNQGTPLLLNAVSKHYAEN---IVLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGL 465
+RL+ G +++N++ K ++EN + ++ + L++ GQ A++G +G GK+TL+ +L GL
Sbjct: 301 SRLHAG--VVINSLKKVFSENGKKVAVDGVSLNMYEGQITALLGHNGAGKTTLMSMLTGL 358
Query: 466 ETPTAGDVL 492
PT+G+ +
Sbjct: 359 FPPTSGNAV 367
Score = 40.7 bits (91), Expect = 0.002
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 6/65 (9%)
Frame = +1
Query: 307 QGTPLLLNAVSKHYAENI------VLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGLE 468
+G L+L+ ++K + E I ++ L L +P G+ ++G +G GK+T R+L G E
Sbjct: 1246 RGDVLILDELTKVFREKIGGASLLAVDHLSLGVPMGECFGLLGINGAGKTTTFRMLTGDE 1305
Query: 469 TPTAG 483
T T+G
Sbjct: 1306 TMTSG 1310
>SB_56043| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 626
Score = 46.4 bits (105), Expect = 3e-05
Identities = 27/54 (50%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +1
Query: 334 VSKHYAENI-VLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGLETPTAGDVL 492
VS Y E +L+ L IPAG+ VA+VG SG GKST++RLL P G VL
Sbjct: 416 VSFQYIEGQRILDGLSFSIPAGKKVAIVGGSGSGKSTIVRLLFRFFDPQGGRVL 469
>SB_39005| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 185
Score = 44.8 bits (101), Expect = 1e-04
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = +1
Query: 256 PGLSFEGGHGMNTARLNQGTPLLLNAVSKHYAENI-VLNQLDLHIPAGQFVAVVGRSGGG 432
P L E + R+ T L + ++K Y L+ +DL + G F A++G +G G
Sbjct: 88 PHLFAEDALSITGVRIFMSTALSIRQLTKTYGNGFQALHGIDLDVAEGDFYALLGPNGAG 147
Query: 433 KSTLLRLLAGLETPTAGDV 489
KST + +L+ L T ++G V
Sbjct: 148 KSTTIGILSTLVTKSSGTV 166
>SB_37973| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 3369
Score = 43.2 bits (97), Expect = 3e-04
Identities = 17/45 (37%), Positives = 30/45 (66%)
Frame = +1
Query: 358 IVLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGLETPTAGDVL 492
+ ++ L L++ GQ A++G +G GK+T + +L GL TPT+G +
Sbjct: 215 VAVDNLSLNMYKGQITALLGHNGAGKTTTMSILTGLFTPTSGSAM 259
Score = 31.9 bits (69), Expect = 0.73
Identities = 15/69 (21%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = +1
Query: 280 HGMNTARLNQGTPLLLNAVSK-HYAENIVLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLL 456
H +N ++ + + ++ + H ++ ++ L + IP G+ ++G +G GK+T +L
Sbjct: 1240 HSLNPEQIKKESVIVKDLTKVYHGSDRTAVDHLCIGIPRGECFGLLGVNGAGKTTTFSML 1299
Query: 457 AGLETPTAG 483
G ++ + G
Sbjct: 1300 TGDQSISEG 1308
>SB_36385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 42.3 bits (95), Expect = 5e-04
Identities = 23/57 (40%), Positives = 32/57 (56%)
Frame = +1
Query: 319 LLLNAVSKHYAENIVLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGLETPTAGDV 489
+ ++ V Y + + ++L+IP G VAVVG+ G GKSTLL L G T G V
Sbjct: 278 MFVDPVHYSYVVWLPIYSINLNIPEGSLVAVVGQVGCGKSTLLSALLGETEKTKGQV 334
Score = 30.7 bits (66), Expect = 1.7
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +1
Query: 325 LNAVSKHYAENI--VLNQLDLHIPAGQFVAVVGRSGGGKSTL-LRLLAGLETPTAGDVLA 495
++++ Y E++ L + I G+ + +VGR+G GKS+L L L LE V+
Sbjct: 903 IDSLDLRYRESLPLALKDISCDIQPGEKIGIVGRTGAGKSSLSLALFRMLEAAGGKIVID 962
Query: 496 G 498
G
Sbjct: 963 G 963
>SB_10268| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 421
Score = 42.3 bits (95), Expect = 5e-04
Identities = 21/48 (43%), Positives = 28/48 (58%)
Frame = +1
Query: 361 VLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGLETPTAGDVLAGTT 504
VL L I G+ VA+VG SGGGKST++ L+ P G++ G T
Sbjct: 175 VLKALSFKINPGETVALVGPSGGGKSTVISLIERFYDPMTGNIRIGDT 222
>SB_59357| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1716
Score = 41.5 bits (93), Expect = 9e-04
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Frame = +1
Query: 304 NQGTPLLLNAVSKHYAE-NIVLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGLETPTA 480
++G +L + K++ + + VL ++ +HI GQ V VVGR+G GKS+L+R + + P
Sbjct: 1167 HEGEMVLHDVTFKYHDDGHEVLKRISVHIKDGQKVGVVGRTGAGKSSLVRAIYRMPEPQG 1226
Query: 481 GDVL 492
V+
Sbjct: 1227 AIVV 1230
Score = 30.3 bits (65), Expect = 2.2
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +1
Query: 394 GQFVAVVGRSGGGKSTLLRLLAGLETPTAGDVLAG 498
G+ V V G G GKSTLL ++ G ++G VL G
Sbjct: 513 GELVLVTGPVGCGKSTLLSVILGEIPISSGKVLRG 547
>SB_36388| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1570
Score = 41.5 bits (93), Expect = 9e-04
Identities = 21/42 (50%), Positives = 27/42 (64%)
Frame = +1
Query: 364 LNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGLETPTAGDV 489
L+ ++L+IP G VAVVG+ G GKSTLL L G G+V
Sbjct: 564 LHNINLNIPDGSLVAVVGQVGCGKSTLLSALLGETEKVTGEV 605
Score = 33.1 bits (72), Expect = 0.31
Identities = 17/39 (43%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +1
Query: 358 IVLNQLDLHIPAGQFVAVVGRSGGGKSTL-LRLLAGLET 471
+VL + + I G+ + +VGR+G GKSTL L L LE+
Sbjct: 1347 LVLKNISVDIQPGEKIGIVGRTGAGKSTLTLALFRILES 1385
>SB_30376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1758
Score = 41.1 bits (92), Expect = 0.001
Identities = 20/47 (42%), Positives = 30/47 (63%)
Frame = +1
Query: 352 ENIVLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGLETPTAGDVL 492
E ++ LDL GQ V + G +G GK++LLR++ GL P +GDV+
Sbjct: 1558 EEPLVADLDLVFARGQNVLITGMAGCGKTSLLRVIRGLWEPLSGDVV 1604
>SB_22546| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 844
Score = 40.7 bits (91), Expect = 0.002
Identities = 22/43 (51%), Positives = 27/43 (62%)
Frame = +1
Query: 361 VLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGLETPTAGDV 489
VL L L I +GQ VA+VG SG GKSTL++L+ P G V
Sbjct: 134 VLKGLHLTIRSGQTVALVGESGCGKSTLIKLVQRFYDPAEGTV 176
>SB_16306| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 958
Score = 40.7 bits (91), Expect = 0.002
Identities = 19/44 (43%), Positives = 29/44 (65%)
Frame = +1
Query: 361 VLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGLETPTAGDVL 492
+L ++ + G+ +A++G SG GK+TLL +LAG AGDVL
Sbjct: 24 ILKTINGKVRPGEMLALMGPSGSGKTTLLNVLAGRMAKDAGDVL 67
>SB_7365| Best HMM Match : ABC_membrane (HMM E-Value=0)
Length = 1301
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/41 (48%), Positives = 27/41 (65%)
Frame = +1
Query: 361 VLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGLETPTAG 483
VLN L L + +GQ VA+VG SG GKST+++L+ P G
Sbjct: 669 VLNGLSLTVRSGQTVALVGESGCGKSTVIKLIQRFYDPENG 709
>SB_40840| Best HMM Match : ABC-3 (HMM E-Value=2.4)
Length = 235
Score = 39.5 bits (88), Expect = 0.004
Identities = 19/36 (52%), Positives = 25/36 (69%)
Frame = +1
Query: 355 NIVLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAG 462
++V ++L +PAG VAVVG+ G GKSTLL L G
Sbjct: 188 SLVALSINLDVPAGSLVAVVGQVGCGKSTLLSALLG 223
>SB_33973| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1184
Score = 39.5 bits (88), Expect = 0.004
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Frame = +1
Query: 250 AGPGLSFEGGHGMNTARLNQGTPLLLNAVSKHYAE---NIVLNQLDLHIPAGQFVAVVGR 420
AG G S E G + + + L++V+ E N+++N + + +P G AV G
Sbjct: 388 AGAGTSDESRGGGESESAEEAGGITLSSVTCIAYEDNNNVLINDITVQLPEGSLTAVTGP 447
Query: 421 SGGGKSTLLRLLAGLETPTAGDVL 492
G GK++LL ++G E P A L
Sbjct: 448 VGSGKTSLLLTISG-ELPLASGEL 470
>SB_52342| Best HMM Match : ABC_tran (HMM E-Value=5.29999e-41)
Length = 336
Score = 38.7 bits (86), Expect = 0.006
Identities = 18/37 (48%), Positives = 24/37 (64%)
Frame = +1
Query: 346 YAENIVLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLL 456
Y VL + + GQ +A+VG SGGGKST++RLL
Sbjct: 152 YYRKPVLKNISFTVFPGQTLALVGNSGGGKSTIIRLL 188
>SB_44672| Best HMM Match : ABC_tran (HMM E-Value=4.2039e-44)
Length = 945
Score = 38.3 bits (85), Expect = 0.008
Identities = 16/37 (43%), Positives = 26/37 (70%)
Frame = +1
Query: 373 LDLHIPAGQFVAVVGRSGGGKSTLLRLLAGLETPTAG 483
L+L++ GQ ++ +G +G GK+T + +L GL PTAG
Sbjct: 521 LNLNLYEGQIMSFLGHNGAGKTTTMSILTGLFPPTAG 557
>SB_14067| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 38.3 bits (85), Expect = 0.008
Identities = 18/29 (62%), Positives = 23/29 (79%)
Frame = +1
Query: 403 VAVVGRSGGGKSTLLRLLAGLETPTAGDV 489
VA+VG +G GKSTLL+L+ GL +PT G V
Sbjct: 89 VALVGPNGAGKSTLLKLIEGLLSPTEGIV 117
>SB_37511| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 884
Score = 37.5 bits (83), Expect = 0.015
Identities = 16/43 (37%), Positives = 27/43 (62%)
Frame = +1
Query: 364 LNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGLETPTAGDVL 492
++ + + I GQ A++G +G GKSTL+ L G+ P++G L
Sbjct: 512 MHGISMDIYEGQITALLGHNGAGKSTLIGALTGMIQPSSGTAL 554
>SB_36627| Best HMM Match : ABC_tran (HMM E-Value=5.4e-06)
Length = 240
Score = 37.1 bits (82), Expect = 0.019
Identities = 18/57 (31%), Positives = 31/57 (54%)
Frame = +1
Query: 319 LLLNAVSKHYAENIVLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGLETPTAGDV 489
L + + ++Y + +L L + G+ ++GR+G GK+TLL+ L GL G V
Sbjct: 84 LQVQQLHQYYGGSHILRGLSFDVKVGEVTCLLGRNGVGKTTLLKCLMGLIPAKEGAV 140
>SB_27093| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 683
Score = 37.1 bits (82), Expect = 0.019
Identities = 17/48 (35%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Frame = +1
Query: 343 HYA-ENIVLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGLETPTAG 483
HY+ + ++ +++D+ +AVVG +G GK+TLL++L G P G
Sbjct: 346 HYSPDRVIFSKVDISANNESRIAVVGDNGSGKTTLLKILLGELEPVKG 393
Score = 34.3 bits (75), Expect = 0.14
Identities = 20/68 (29%), Positives = 34/68 (50%)
Frame = +1
Query: 286 MNTARLNQGTPLLLNAVSKHYAENIVLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGL 465
M ++ N+ + + Y +L +L I G+ +VGR+G GK+TLLR L+
Sbjct: 196 MESSGTNKSQDIRIENFDLAYGNRSLLKGANLAIAFGRRYGLVGRNGIGKTTLLRTLSKR 255
Query: 466 ETPTAGDV 489
E A ++
Sbjct: 256 ELFVASNI 263
>SB_40697| Best HMM Match : ABC_tran (HMM E-Value=7.1e-07)
Length = 659
Score = 35.9 bits (79), Expect = 0.045
Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 7/92 (7%)
Frame = +1
Query: 235 SASGCAGPGLSFEGGHGMNTARLNQGTP---LLLNAVSKHYAENI----VLNQLDLHIPA 393
S S +G G+ F G T P L+ S EN +L+ + + +
Sbjct: 358 SGSRLSGRGMIFFGRDKGGTTIKTPNVPKKAALIRVKSNPRQENDKSVNILHDISMEVSD 417
Query: 394 GQFVAVVGRSGGGKSTLLRLLAGLETPTAGDV 489
VAV+G G GKSTLL ++G++ G V
Sbjct: 418 DSLVAVIGPVGSGKSTLLETISGMDPTFRGKV 449
>SB_24381| Best HMM Match : MMR_HSR1 (HMM E-Value=2)
Length = 110
Score = 35.9 bits (79), Expect = 0.045
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Frame = +1
Query: 307 QGTPLLLNAVSKHYAENI----VLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAG 462
Q T L L+ VS+ + E + + L + G F AV+G SG GKSTLL L G
Sbjct: 2 QRTVLSLDHVSRSFGEGEQRVDAIVDVSLGVNPGTFAAVMGPSGSGKSTLLGLAVG 57
>SB_1653| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1702
Score = 35.9 bits (79), Expect = 0.045
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +1
Query: 346 YAENI-VLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGLETPTAG 483
YA ++ +L ++L + V VVG G GKSTLL + GLE+ G
Sbjct: 791 YAGDLKILQDIELDVSGSCLVVVVGPVGSGKSTLLSTICGLESGFIG 837
Score = 30.7 bits (66), Expect = 1.7
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 361 VLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGLETPTAGDVLAGTTPR-LKFRKTRE 534
VL + I Q +VGR+G GKS+++ L + T G ++ R L + TRE
Sbjct: 1482 VLKDVSFSIEPRQKFGIVGRTGAGKSSIVASLMRMPEATFGILIDDVEIRGLNLQSTRE 1540
>SB_26155| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 815
Score = 35.5 bits (78), Expect = 0.059
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +1
Query: 391 AGQFVAVVGRSGGGKSTLLRLLAGLETPTA 480
+G+ V V+G SG GKSTL+ +LAG T A
Sbjct: 151 SGELVGVLGPSGAGKSTLINVLAGYRTKFA 180
>SB_32252| Best HMM Match : RVT_1 (HMM E-Value=9.2e-21)
Length = 1033
Score = 35.1 bits (77), Expect = 0.078
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +1
Query: 361 VLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGLETP 474
VL + +HI + V +VGR+G GKS+LL L + P
Sbjct: 891 VLKDVSVHIKPAEKVGIVGRTGAGKSSLLATLFRMAEP 928
Score = 28.3 bits (60), Expect = 8.9
Identities = 15/51 (29%), Positives = 30/51 (58%), Gaps = 5/51 (9%)
Frame = +1
Query: 319 LLLNAVSKHYAENI---VLNQLDLHIPAGQFVAVVGRSGGGKST--LLRLL 456
L+ N +S ++++++ ++ L + G+ +AV+G G GK T LLR +
Sbjct: 155 LVANGISAYWSKDLPKPTIDNLSFAVSQGRMLAVIGEIGSGKFTDDLLRTM 205
>SB_17925| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1075
Score = 34.7 bits (76), Expect = 0.10
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = +1
Query: 364 LNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGLETPTAGDVL 492
L+ + L I A Q V + GR+G GKS+LL L + P G+VL
Sbjct: 850 LDDITLEITAKQKVGIAGRTGAGKSSLLAALFRMPEP-GGEVL 891
>SB_35286| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 34.7 bits (76), Expect = 0.10
Identities = 19/61 (31%), Positives = 35/61 (57%)
Frame = +1
Query: 301 LNQGTPLLLNAVSKHYAENIVLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGLETPTA 480
+N + L + ++ + L++L + P G+ + +VG +G GKST L++LAG + P
Sbjct: 81 INLPSNLEKDTTHRYGPNSFKLHRLPIPRP-GEVLGLVGTNGIGKSTALKILAGKQKPNL 139
Query: 481 G 483
G
Sbjct: 140 G 140
Score = 30.3 bits (65), Expect = 2.2
Identities = 16/43 (37%), Positives = 28/43 (65%), Gaps = 6/43 (13%)
Frame = +1
Query: 364 LNQ-LDLHIPAGQF-----VAVVGRSGGGKSTLLRLLAGLETP 474
LN+ ++I AG+F + ++G +G GK+T +R+LAG +P
Sbjct: 329 LNEDFQMNIDAGEFTDSEIIVMLGENGTGKTTFIRMLAGKLSP 371
>SB_27355| Best HMM Match : ABC_tran (HMM E-Value=1.1e-37)
Length = 226
Score = 34.7 bits (76), Expect = 0.10
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +1
Query: 397 QFVAVVGRSGGGKSTLLRLLAGLETPTAGDV 489
+ + +VG +G GK+TLLR L G PT+G +
Sbjct: 2 EIIGLVGENGNGKTTLLRSLCGELNPTSGTI 32
>SB_33165| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1310
Score = 34.3 bits (75), Expect = 0.14
Identities = 20/43 (46%), Positives = 25/43 (58%)
Frame = +1
Query: 364 LNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGLETPTAGDVL 492
L+ + L I A Q V + GR+G GKS LL L L P G+VL
Sbjct: 1085 LDDITLEITAKQRVGIAGRTGAGKSFLLAALFRLPEP-GGEVL 1126
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +1
Query: 391 AGQFVAVVGRSGGGKSTLLRLLAGLETPTAGDV 489
AG V + G G GKSTLL + G AG +
Sbjct: 484 AGDLVIITGPVGSGKSTLLMTIQGELPLNAGSI 516
>SB_30085| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 472
Score = 34.3 bits (75), Expect = 0.14
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +1
Query: 361 VLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGLETP 474
VL+ L++ I G+ V V GR+G GKS+L+ L + P
Sbjct: 248 VLHNLNIDIKGGERVGVAGRTGAGKSSLVAALFRMPDP 285
>SB_12613| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 651
Score = 34.3 bits (75), Expect = 0.14
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +1
Query: 361 VLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLA 459
+LN ++ + G +A++G SG GKSTL+ +LA
Sbjct: 209 ILNDVNGTVKPGSLLAIMGASGAGKSTLMNVLA 241
>SB_58724| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 228
Score = 33.9 bits (74), Expect = 0.18
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +1
Query: 361 VLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAG 462
VL + I AG+ A++G SG GK+TLL L+G
Sbjct: 153 VLQSVTGEIRAGEVTAIMGPSGAGKTTLLNTLSG 186
>SB_45078| Best HMM Match : ABC_tran (HMM E-Value=2.6e-36)
Length = 972
Score = 33.5 bits (73), Expect = 0.24
Identities = 19/46 (41%), Positives = 25/46 (54%)
Frame = +1
Query: 337 SKHYAENIVLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGLETP 474
S H VL ++ I G+ V +VGR+G KS+LL L L TP
Sbjct: 811 SHHKTLPRVLRNMNFCIKGGEKVGIVGRNGLEKSSLLAALLRLNTP 856
>SB_29759| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1308
Score = 33.5 bits (73), Expect = 0.24
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +1
Query: 340 KHYAENIVLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGLETPTAGDV 489
KH V ++L + VAV+G G GK+TLL + G + T G +
Sbjct: 419 KHKGGRDVFCDVNLSVEENDIVAVIGAVGSGKTTLLSAILGQVSCTKGKI 468
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/44 (29%), Positives = 26/44 (59%)
Frame = +1
Query: 361 VLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGLETPTAGDVL 492
VL +++ I + V + GR+G GK++++ L + T GD++
Sbjct: 1063 VLKEVNFRIGCHEKVGIAGRTGAGKTSIVSCLLRMPEAT-GDIM 1105
>SB_52656| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1321
Score = 33.1 bits (72), Expect = 0.31
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = +1
Query: 337 SKHYAENIVLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGLETP 474
S H + VL + I + V +VGR+G GKS+LL +L L P
Sbjct: 764 SYHQSLPHVLKNVKFSIRNNEKVGIVGRTGAGKSSLLAVLFRLNNP 809
>SB_42212| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 301
Score = 33.1 bits (72), Expect = 0.31
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = +1
Query: 319 LLLNAVSKHYAE--NIVLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGLETPTAGDVL 492
L L VS Y E + L ++++ I A V +VGR+G GKS+L+ L + P ++
Sbjct: 61 LRLQDVSLAYYEGGSCALEEVNVRIQAKGKVGIVGRTGAGKSSLVAALFRMPEPKGEVII 120
Query: 493 AG 498
G
Sbjct: 121 DG 122
>SB_34187| Best HMM Match : ABC_tran (HMM E-Value=1.49995e-41)
Length = 1515
Score = 33.1 bits (72), Expect = 0.31
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +1
Query: 319 LLLNAVSKHYAEN--IVLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGLETPTAGDV 489
L L V Y N VL + L + G+ V +VG++G GKS++ L + PT G+V
Sbjct: 1335 LSLRDVCLAYTPNSPCVLRDITLDVRPGERVGIVGKTGAGKSSVFAALFRMPDPT-GEV 1392
>SB_11108| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1266
Score = 33.1 bits (72), Expect = 0.31
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +1
Query: 319 LLLNAVSKHYAEN--IVLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGLETPTAGDVL 492
L + VS Y E VL+ + L + + V +VGR+G GKS+L+ L + P V+
Sbjct: 1025 LSIQGVSLEYLEGGTRVLDGVSLEVLPKEKVGIVGRTGAGKSSLVAALFRIREPKGRIVV 1084
Query: 493 AG 498
G
Sbjct: 1085 DG 1086
>SB_40653| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 672
Score = 32.7 bits (71), Expect = 0.42
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +1
Query: 361 VLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGLETPTAGDVL 492
V+ +L I +G+ + +VGR+G GKSTL L + +G ++
Sbjct: 437 VIKKLTFEINSGEKIGIVGRTGAGKSTLSLALFRILERASGKIV 480
>SB_34083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 580
Score = 32.3 bits (70), Expect = 0.55
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +1
Query: 361 VLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGLETPTAGDV 489
+L+ L+L I GQ + V+G G GKS+LL L G V
Sbjct: 79 LLSGLNLSIRKGQLIGVIGGVGSGKSSLLSALTAEMDKLTGQV 121
>SB_40695| Best HMM Match : ABC_tran (HMM E-Value=7.79963e-42)
Length = 355
Score = 31.9 bits (69), Expect = 0.73
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +1
Query: 319 LLLNAVSKHYAEN--IVLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGLETPTAGDVL 492
LL N VS Y ++ VL + I Q + + GR+G GKS+++ L + T G +
Sbjct: 119 LLFNHVSLRYYKDGPQVLKDVTFSIEPQQKIGIAGRTGAGKSSIVASLMRMPEATPGIQI 178
Query: 493 AG 498
G
Sbjct: 179 DG 180
>SB_35301| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 618
Score = 31.9 bits (69), Expect = 0.73
Identities = 19/46 (41%), Positives = 25/46 (54%)
Frame = +1
Query: 337 SKHYAENIVLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGLETP 474
S H + VL+ + I + V VVGR+G GKS+LL L L P
Sbjct: 43 SYHQSLPEVLHNVTCVIKPSEKVGVVGRTGAGKSSLLSTLFRLAEP 88
>SB_7501| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 625
Score = 31.9 bits (69), Expect = 0.73
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +1
Query: 364 LNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGLETPTAGDV 489
L+ + I G + VVG G GKS+LL + G T GD+
Sbjct: 397 LDNISFEIGKGDLLVVVGAVGSGKSSLLMAVLGELPLTRGDI 438
>SB_216| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1315
Score = 31.9 bits (69), Expect = 0.73
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +1
Query: 304 NQGTPLLLNAVSKHYAEN--IVLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGLETPT 477
N+G L + VS Y E VL ++L + + + +VGR+G GKS+L+ L + P
Sbjct: 1071 NRGA-LSVQDVSLEYLEGGTRVLEGVNLEVDPKEKIGIVGRTGAGKSSLVAALFRMPEPK 1129
Query: 478 AGDVLAG 498
++ G
Sbjct: 1130 GRVLIDG 1136
>SB_37300| Best HMM Match : MMR_HSR1 (HMM E-Value=0.061)
Length = 152
Score = 31.5 bits (68), Expect = 0.96
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +1
Query: 394 GQFVAVVGRSGGGKSTLLRLLA 459
G+ VAV+G SG GK+TL+ +LA
Sbjct: 48 GELVAVMGASGSGKTTLINVLA 69
>SB_55554| Best HMM Match : AAA (HMM E-Value=0.022)
Length = 1681
Score = 31.5 bits (68), Expect = 0.96
Identities = 18/50 (36%), Positives = 29/50 (58%)
Frame = +1
Query: 313 TPLLLNAVSKHYAENIVLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAG 462
T + ++AV + E L QL + + + V V+G +G GK+TLL L+G
Sbjct: 241 TAIAMDAVKEESNEGTAL-QLHKVLQSNKNVVVLGDAGSGKTTLLHALSG 289
Score = 29.5 bits (63), Expect = 3.9
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +1
Query: 364 LNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGLETPTAGDVLAGTTPRLKFRKTRE 534
L+ LDL I G V +VG+SG GKS L++ + P + +A + F++ E
Sbjct: 912 LHLLDLMIFDGYPVLLVGQSGTGKSALIQNMVSPRYPYSRIFMAASLSSRLFQEAIE 968
>SB_8906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1116
Score = 31.5 bits (68), Expect = 0.96
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +1
Query: 361 VLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGLETPTAGDV 489
+L +++L + + V+G G GKSTLL + G + G +
Sbjct: 337 ILGKINLDLSGNRLALVIGPVGSGKSTLLSAICGASSSYKGKI 379
>SB_31867| Best HMM Match : ABC_tran (HMM E-Value=1.3e-36)
Length = 674
Score = 31.1 bits (67), Expect = 1.3
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +1
Query: 364 LNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAG 462
L+ L +P+G + V+G G GKS+LL + G
Sbjct: 368 LDGLSFDVPSGCLLGVIGAVGSGKSSLLNAILG 400
>SB_59051| Best HMM Match : ABC_tran (HMM E-Value=2.4e-41)
Length = 474
Score = 31.1 bits (67), Expect = 1.3
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 364 LNQLDLHIPAGQFVAVVGRSGGGKSTLLRLL 456
L L + AG+ + +VGR+G GKS+++ L
Sbjct: 83 LKDLTFSVSAGEKIGIVGRNGSGKSSVIHAL 113
>SB_20992| Best HMM Match : ABC_tran (HMM E-Value=1.3e-36)
Length = 641
Score = 31.1 bits (67), Expect = 1.3
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +1
Query: 364 LNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAG 462
L+ L +P+G + V+G G GKS+LL + G
Sbjct: 37 LDGLSFDVPSGCLLGVIGAVGSGKSSLLNAILG 69
>SB_34997| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 845
Score = 30.7 bits (66), Expect = 1.7
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = +1
Query: 325 LNAVSKHYA---ENIVLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGLETPTAGDVL 492
LN V+ H+ + L L++ A + + G G GKSTLL + G T G +L
Sbjct: 476 LNNVTCHWGRTNQETALQNLNMRANAKELTLINGPGGSGKSTLLLAVLGELPVTEGSIL 534
>SB_58013| Best HMM Match : ABC_membrane (HMM E-Value=6.3e-28)
Length = 951
Score = 30.7 bits (66), Expect = 1.7
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +1
Query: 364 LNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGLETPTAGDVLAG 498
L +DL + G + + G G GKS+LL+ + T G V G
Sbjct: 105 LFDIDLEVKKGSLIGICGSVGSGKSSLLQCILSQMRKTKGRVGIG 149
>SB_28063| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1238
Score = 30.7 bits (66), Expect = 1.7
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +1
Query: 361 VLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGLETPTAGDVLAG 498
VL + L + + V +VGR+G GKS+L+ L + P ++ G
Sbjct: 1011 VLEGISLEVQPKEKVGIVGRTGAGKSSLVAALFRMPEPKGRVLIDG 1056
>SB_58705| Best HMM Match : ABC_tran (HMM E-Value=5.7e-05)
Length = 284
Score = 30.3 bits (65), Expect = 2.2
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +1
Query: 394 GQFVAVVGRSGGGKSTLLRLLA 459
G +AV+G SG GKSTL+ +LA
Sbjct: 143 GTLLAVMGASGAGKSTLMNVLA 164
>SB_6025| Best HMM Match : MMR_HSR1 (HMM E-Value=1.1e-17)
Length = 98
Score = 29.9 bits (64), Expect = 2.9
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +1
Query: 403 VAVVGRSGGGKSTLLRLLAGLETPTAGDVLAGTTPRLKF 519
VAVVGR GKSTL+ + G DV T R+ +
Sbjct: 24 VAVVGRPNVGKSTLVNRILGRRAAVVQDVPGVTRDRVSY 62
>SB_24967| Best HMM Match : Drf_FH1 (HMM E-Value=0.65)
Length = 1799
Score = 29.1 bits (62), Expect = 5.1
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 135 RQITNA*IGRNGFGNNQRQPHQAQRKTHADHN 40
+++T I G G R+P+QA RKTH N
Sbjct: 1703 QRVTKMEIPVKGSGEQARKPNQAPRKTHLPEN 1734
>SB_43996| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1056
Score = 29.1 bits (62), Expect = 5.1
Identities = 18/76 (23%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = +3
Query: 342 TLRGKYRPEPTGFTYSGRSVCGGGGPQRWWQKYPAAPAGRSGNANRR-RCVSGHHTAAEI 518
TLR ++ P+ TG+ + GR + + P R G R+ + ++ HH ++
Sbjct: 574 TLRERFHPQATGYPHDGRRLFAHSLSDDSGTR-QGCPIQRHGQPGRQLQTIADHHQRSQS 632
Query: 519 QEDTRMMFQDARLLPW 566
+ + DAR W
Sbjct: 633 EAMCPGLGVDARFSSW 648
>SB_53823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 665
Score = 28.7 bits (61), Expect = 6.8
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +1
Query: 385 IPAGQFVAVVGRSGGGKSTLLRLLAGLETPTAGDVLAGT 501
+ +G+ V G +G GKS LLR L G+ P V A T
Sbjct: 200 VRSGRNVFFTGSAGTGKSFLLRRLIGMLPPQGTFVTAST 238
>SB_42790| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 552
Score = 28.7 bits (61), Expect = 6.8
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Frame = +1
Query: 301 LNQGTPLLLNAVS--KHYAENIVLNQ--LDLHIPAGQFVAVVGRSGG 429
LN+ TPLL + + +A+N L+Q L IP+ QF GR GG
Sbjct: 59 LNEQTPLLGRSTETDRSFADNKSLSQSQASLFIPSVQFSLYSGRGGG 105
>SB_58335| Best HMM Match : SMC_N (HMM E-Value=0.023)
Length = 354
Score = 28.3 bits (60), Expect = 8.9
Identities = 22/62 (35%), Positives = 27/62 (43%)
Frame = +1
Query: 307 QGTPLLLNAVSKHYAENIVLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGLETPTAGD 486
Q TP+L +Y +N L L P G V G +G GKS L R L L G
Sbjct: 102 QTTPMLHTLAVANYRS---INNLVL--PLGPLNLVTGANGSGKSNLYRALRLLAETAQGG 156
Query: 487 VL 492
V+
Sbjct: 157 VV 158
>SB_55989| Best HMM Match : zf-C2H2 (HMM E-Value=8e-08)
Length = 1011
Score = 28.3 bits (60), Expect = 8.9
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = -2
Query: 172 PPRPFAKTPAHSSPDNQCLNWQKWF--RQQSASATSG 68
PP+P K +H PD C +KWF R Q+ S SG
Sbjct: 607 PPKP--KPGSHLDPDTHCPLCKKWFNSRVQADSHYSG 641
>SB_22559| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 944
Score = 28.3 bits (60), Expect = 8.9
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
Frame = +1
Query: 226 HC*SASGCAGPGLSFEG-----GHGMNTARLNQGTPLLLNAV 336
HC S +GCAGP ++ +G H + R+N PL+L +
Sbjct: 63 HC-SKAGCAGPDINDDGSVWWVSHERESLRVNAVLPLVLEMI 103
>SB_20224| Best HMM Match : ABC_tran (HMM E-Value=2.2e-36)
Length = 380
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +1
Query: 364 LNQLDLHIPAGQFVAVVGRSGGGKSTLL 447
L++L I G +AV G G GKSTLL
Sbjct: 164 LSRLSFRINQGGLLAVTGPIGSGKSTLL 191
>SB_59333| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 28.3 bits (60), Expect = 8.9
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = -2
Query: 178 RLPPRPFAKTPAHSSPDNQCLNWQKWFRQQSASATSGP 65
R PPRP +P Q W RQQS +SGP
Sbjct: 26 RNPPRPARGQTLPRAPGGQNPLRPPWTRQQSVEQSSGP 63
>SB_11212| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1175
Score = 28.3 bits (60), Expect = 8.9
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = -2
Query: 178 RLPPRPFAKTPAHSSPDNQCLNWQKWFRQQSASATSGP 65
R PPRP +P Q W RQQS +SGP
Sbjct: 583 RNPPRPARGQTLPRAPGGQNPLRPPWTRQQSVEQSSGP 620
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,460,774
Number of Sequences: 59808
Number of extensions: 602398
Number of successful extensions: 1684
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 1549
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1684
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2586032617
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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