Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0362.Seq
         (886 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    25   0.79 
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   4.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.6  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    22   5.6  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    22   5.6  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    22   7.4  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    22   7.4  

>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 25.0 bits (52), Expect = 0.79
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = -2

Query: 579 LQNADDATLTAETLFSEIQEQHEASLLP 496
           LQ  D+  L  ETL   I+E  EA L+P
Sbjct: 209 LQPDDNNRLRGETLEVAIKEDREAGLIP 236


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +1

Query: 568 CVLKSRPDRANPAAHLHVHGIP 633
           CV  S+   A+ +A ++V+G+P
Sbjct: 491 CVASSKVGSADHSARINVYGLP 512


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -1

Query: 451  HNSLPTYNCVLGEINLELNFNGV 383
            HN    Y CVLGE+  +    G+
Sbjct: 1113 HNCNAYYRCVLGELRKQYCAGGL 1135


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 353 VNKILERKDKHPVKIEFKIYL 415
           +++ L  K   PVKI  K+YL
Sbjct: 106 IDETLNSKPLKPVKIRTKVYL 126


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 353 VNKILERKDKHPVKIEFKIYL 415
           +++ L  K   PVKI  K+YL
Sbjct: 102 IDETLNSKPLKPVKIRTKVYL 122


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 8/25 (32%), Positives = 18/25 (72%)
 Frame = +3

Query: 681 LITFLYTTLCSKILFTNKASSRVRN 755
           ++ F YT++C +I  ++++S R R+
Sbjct: 218 VLIFTYTSICIEIWQSSESSLRPRS 242



 Score = 21.4 bits (43), Expect = 9.7
 Identities = 6/23 (26%), Positives = 13/23 (56%)
 Frame = +2

Query: 371 RKDKHPVKIEFKIYLTENTVIRW 439
           R +K+P ++  + Y+ +    RW
Sbjct: 375 RSNKYPTRVPHRPYVAQYNARRW 397


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -2

Query: 324 GDAWPSWRLSALLAKELELD 265
           GD W SW     + +EL LD
Sbjct: 381 GDLWLSWEEGMKVFEELLLD 400


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,465
Number of Sequences: 336
Number of extensions: 3444
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24513621
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)